Detail



ID : Ahg471334

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471334|fgenesh2_kg.1__1288__AT1G11870.2
Sequence
ATGAGTTTAC ACAAATTGAG ACTCGCTGCA GTTCCTATAG CCTTCTCTTC TCGTCTCTTC TTCCTCAAGC CATTTCCCAA TACTCTAACC CTAGGTTTGT TTTCCCGCCA TCTTCAACCC CATAAGCCTC TCCTAGTCAG AGCTTTCTCC GCTTCCGCCG CCGTACAAGA TATTCCGGCC ACGCAGGCCT CAGATTCCTC TGCGAGGCCT CAGTGGAAAG CAGCGATTGA TTTCAAATGG ATAAGAGATA ATAAGGAAGC AGTCAAAATC AACATTAAGA ACCGAAATTC GAATGCTAAT TTGGAAGCAG TGCTTGAGCT TTACGAGAAC ATGGTCAATC TCCAAAAGGA AGTTGAGCAG CTTCGTGAGG AAAGAAACAA CGTTGCCAAG AAGATGAAAG GGAAGCTGGA ACCATCACAA CGTGAGACAC TCGTACAAGA AGGTAAAAAT CTTAAGGAAA GTCTTGTAAC TCTGGAGGAA GACCTTGTGA AGCTTAAAGA TGAGCTGCAA CATGTAGCAC AGTCTATACC AAATATGACT CACCCTGATG TTCCTATTGG AGGAGAGGAT TCATCGGCAG TTAGAAAGGA GGTTGGTAGT CCACGTGAGT TTAGTTTTCC AATCAAGGAT CATCTTCAGC TTGGGAAGGA TCTTGATCTC ATTGATTTTG ACTCTGCTGC AGAGGTAAGT GGTTCAAAAT TCTTCTATTT GAAAAATGAG GCAGTTTTAT TGGAGATGGC GCTCCTTAAT TGGACACTAT CACAAGTCAT GAAGAAGGGT TTTACACCCC TAACGACCCC TGAAATCGTG AGATCTTCTA TTGTTGAGAA ATGCGGTTTC CAACCTCGTG GAGATAATAC TCAGGTTTAT TCTATAGATG GAACTGACCA ATGTCTCATT GGTACTGCTG AAATTCCAGT AGGAGGAATC CACATGGACT CTATTCTTCT TGAGTCGGCA TTACCTTTGA AATATATAGC GTTCTCTCAT TGCTTCCGTA CTGAAGCGGG TGCAGCTGGC GCTGCCACAA AAGGTCTTTA CCGAGTTCAT CAGTTCAGCA AAGCAGAAAT GTTTGTCATA TGCCGACCTG AAGATAGTGA ATCCTTCCAC CAAGAACTCA TTCAGATTGA AGAAGATTTG TTCACTTCCC TAGGATTACA CTTCAAAACA TTGGATATGG CCACAGCGGA TTTAGGCGCT CCAGCTTACC GCAAGTTTGA CGTTGAAGCA TGGATGCCCG GTTTAGGACG ATTTGGCGAG ATATCAAGCG CATCAAACTG CACGGATTAC CAAAGTCGGA GACTGGGAAT CCGTTACCGC CCATCTGAAC CACCTCAGAC GGGTCCTAAG AAAGGTAAAG CGAATCTTCC AGCTACTAAG TTCGTCCACA CTCTAAACGC AACGGCATGT GCGATCCCGA GGATGATGGT GTGTTTACTG GAGAATTACC AGCAAGAAGA TGGATCTGTG GTGATCCCTG AGCCCCTTAG GCCTTTCATG GGAGGCATTG AACTCATCAA ACCCAAGCTC AAGTAGTTTT TTTATAGTTA GATCTTTGCA ATTCTTGCTG TTATTCCTCT TGTACTTGAA ATTTGTTCAT TATACTTTGT TGTGTTCTTT TCTCAAAACA TACAATTTAT AGTTTATATC ATCATAACCG AATGTTCTTT GATTCGATAA TAATGGAAGG GAAATATACA TT 
Length1702
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4552220.. 4554959
Download Sequence
A.thaliana
AGI-codeAT1G11870.2
DescriptionSeryl-tRNA synthetase
TAIR curator summarySeryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.
Alias[ATSRS][OVA7][SRS][ovule abortion 7][Seryl-tRNA synthetase]
Gene coexpression
MR
MR Locus Description
7.48331 Ahg487695
10 Ahg489803 cytosolic invertase 2
10.2956 Ahg480484 tRNA/rRNA methyltransferase (SpoU) family protein
12 Ahg491167 P-loop containing nucleoside triphosphate hydrolases superfamily protein
12.49 Ahg487703 P-loop containing nucleoside triphosphate hydrolases superfamily protein
14.8324 Ahg905049 Alpha amylase family protein
23.1084 Ahg928915 homogentisate prenyltransferase
25.2389 Ahg492304 DNA photolyases;DNA photolyases
28.1425 Ahg938259 Tetratricopeptide repeat (TPR)-like superfamily protein
28.2843 Ahg950227
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression