Detail



ID : Ahg471698

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471698|fgenesh2_kg.1__1652__AT1G15100.1
Sequence
AAGATGGGGC TACAAGGTCA GCTAAGTGAC GTCTCTTCCG ATTCAATCCC TCTTATGCTA ATCTCTCTCC TCGCCGTCTT CATCAACCAT GTCCGATCTT TCCTTCTCCG TCTCACCGCT AAATCAAATC CTAATCTCCC CGTCGACGAT GTCTCTATAG CATCGGGACT AGCCAACATA ATCGTGCTCG CCGATCAGCT GAGCTTGAAT CGGTTATTCT CGTACCGGTG CGGTGACGGA GGAGGGTCCG ATTGTGTGGT GTGTTTGTCG AAGCTTAAGG AAGGTGAAGA GGTGAGGAAG CTGGAATGTC GACACGTGTA CCACAAGAAG TGTTTAGAAG GATGGCTTCA TCAACTCAAT TTCACTTGTC CTCTTTGTAG ATCTGCTTTG GTCTCCGATG ATTGCGTCTC TAAAACGCAG CGCCGCGTTG GAAGGGATTT GATCTCGTGT TTCTCTCTCC ACTGAGTTTG ATCCGACGGC ATCCGAGAGA TCTACGGTGG CTGGCTGGTT CGGTTTGACC ACGCGTGCCC CTTCTTTTCT CGGTTTTTTT TTTTGAGGTC TCTCTCTTCT GTGAGAGGAG AGGACCTTTT TGTTTGTTTT TTCACTTCTC GATTTCGTTT TGTAAATTTT GAAATATACA AATTTTCACC GTTTGTATCT TT 
Length662
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6103174.. 6103815
Download Sequence
A.thaliana
AGI-codeAT1G15100.1
DescriptionRING-H2 finger A2A
TAIR curator summaryEncodes a putative RING-H2 finger protein RHA2a.
Alias[RHA2A][RING-H2 finger A2A]
Gene coexpression
MR
MR Locus Description
8 Ahg494080 HXXXD-type acyl-transferase family protein
10.198 Ahg477094 evolutionarily conserved C-terminal region 8
15.0997 Ahg924738 flavin-monooxygenase glucosinolate S-oxygenase 4
15.6525 Ahg950020 Tyrosine transaminase family protein
22.2486 Ahg947850 cycling DOF factor 2
23.2379 Ahg488439 NAD(P)-binding Rossmann-fold superfamily protein
28.1425 Ahg325294 Late Embryogenesis Abundant 4-5
30.05 Ahg922442
30.7246 Ahg934499 SOUL heme-binding family protein
31.6228 Ahg333508 Late embryogenesis abundant protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression