| Annotation |
|---|
| Description | jgi|Araly1|471773|fgenesh2_kg.1__1727__AT1G15750.2 |
| Sequence |
CGAAGAGAGA GAAAATCCCT TTCTCTAGAT AGAGAGAGAG AGAAGAAGAA GCTTTTTAAT TTTCTTTCTT TCAAGTTTCC TTTTTTCGAT AGAGAGAAAA AGAGTCCAAA AATCAATCCA TCACCTATTT CGTCTCTGTG GTCTTCATCG ATCTCTCTTT CTTCTTTCAT GAGATGCGAA GTTTCTGGAT ATTTTTTCAG ATATAGATCT GGTGATAGTT TTGGTAGGTG TTGTGAATCT GATTTAAGGA AGTGAGAAAA AAACATGTCT TCTCTTAGTA GAGAGCTCGT TTTCTTGATC TTACAGTTTC TTGATGAAGA GAAGTTTAAA GAGACTGTTC ACAAGCTTGA ACAAGAATCT GGGTTTTTCT TCAATATGAA GTATTTTGAG GATGAGGTGC ACAATGGTAA TTGGGATGAG GTTGAGAAGT ATCTCTCTGG TTTCACTAAA GTAGATGATA ATAGATACTC TATGAAGATA TTCTTCGAGA TAAGAAAGCA GAAGTATCTC GAGGCTTTGG ATAAGCATGA TCGTCCCAAG GCTGTGGATA TACTAGTGAA GGATTTGAAA GTGTTTTCAA CTTTTAATGA GGAGCTTTTC AAGGAAATAA CGCAGCTCTT GACATTGGAG AACTTCCGGG AGAATGAACA GTTGTCCAAG TATGGGGACA CCAAGTCTGC AAGAGCTATA ATGTTGGTGG AACTCAAAAA GCTGATTGAG GCGAATCCGT TGTTCCGTGA TAAATTGCAG TTCCCTACTC TTAGAAATTC AAGGCTGAGG ACTTTGATCA ACCAGAGCTT AAATTGGCAG CATCAGCTTT GTAAAAATCC AAGGCCAAAT CCAGATATAA AGACTCTTTT TGTGGATCAC TCTTGTGGCC CTCCAAATGG CGCACGGGCT CCATCGCCTG TGAACAATCC TCTGCTTGGA GGAATACCAA AGGCTGGAGG ATTTCCTCCT TTAGGCGCAC ACGGGCCATT TCAACCAACG GCATCACCCG TTCCAACGCC TCTTGCTGGT TGGATGTCTA GTCCATCCTC TGTCCCACAT CCAGCTGTCT CAGCAGGAGC CATTGCACTT GGTGGTCCAT CAATCCCAGC GGCATTGAAG CACCCGAGAA CTCCTCCAAC TAATGCTGCT TTAGACTACC CGTCAGCAGA TTCTGAACAT GTCTCAAAAA GAACAAGGCC AATGGGAATT TCTGACGAGG TGAATCTAGG CGTGAACATG TTACCGATGT CATTTTCAGG GCAGGCCCAT GGTCATACTC CGGCTTTCAA AGCACCTGAT GACTTGCCCA AGACAGTTGC GCGAACTTTG AGTCAGGGCT CATCTCCCAT GAGCATGGAT TTCCATCCAA TTAAACAGAC TCTGCTTCTA GTTGGTACAA ATGTAGGTGA TATCGGGCTG TGGGAAGTTG GTTCTCGCGA AAGATTAGTA CAGAAGACCT TCAAAGTCTG GGATTTGAGT AAATGTTCAA TGCCCTTGCA GGCTGCTCTG GTGAAAGAAC CTGTCGTTTC TGTCAACCGT GTGATATGGA GCCCTGACGG TTCCTTGTTT GGAGTTGCTT ACTCGAGACA TATTGTGCAA CTATACTCTT ATCACGGAGG TGAAGACATG AGGCAACACC TGGAGATTGA TGCTCATGTT GGTGGTGTGA ACGATATTTC CTTCTCGACT CCGAACAAGC AACTATGTGT AATAACTTGT GGTGATGACA AAACCATCAA GGTTTGGGAC GCTGCAACAG GTGTCAAAAG GCATACTTTT GAAGGCCATG AAGCTCCTGT TTATTCCGTT TGTCCTCATT ACAAGGAAAA CATTCAGTTC ATATTTTCAA CAGCTCTTGA TGGGAAAATT AAGGCATGGT TGTATGATAA TATGGGTTCC CGAGTTGACT ATGATGCACC TGGTCGCTGG TGTACTACAA TGGCTTATAG TGCCGATGGT ACTAGGCTAT TCTCTTGTGG GACGAGTAAA GATGGAGAGT CTTTCATTGT TGAGTGGAAT GAAAGCGAAG GAGCTGTTAA AAGAACTTAT CAAGGATTCC ACAAGCGTTC TCTAGGTGTT GTGCAGTTTG ATACAACTAA AAACCGTTAT CTAGCTGCGG GTGATGACTT CTCCATCAAG TTCTGGGATA TGGACACTGT ACAGCTTTTA ACTGCCATTG ATGGCGATGG AGGCCTCCAG GCAAGCCCGC GTATCCGGTT TAACAAGGAA GGCTCTCTCT TGGCCGTGTC TGGAAACGAG AATGTGATCA AGATTATGGC AAACTCAGAT GGTCTAAGGC TATTGCACAC TTTTGAGAAC ATATCATCTG AATCCTCTAA GCCTGCAATA AACAGCATTG CAGCGGCAGC GGCAGCTGCT GCAACGAGTG CTGGTCACGC AGATCGATCA GCCAATGTAG TTTCCATCCA AGGAATGAAT GGAGATTCGC GGAATATGGT GGATGTGAAG CCAGTGATTA CTGAAGAATC AAATGATAAG TCTAAGATAT GGAAGCTTAC TGAAGTCAGC GAGCCTTCTC AATGCAGGTC ACTGAGACTC CCTGAGAATC TGAGAGTCGC CAAGATATCA AGATTGATTT TCACGAATTC GGGAAACGCT ATTTTGGCTT TGGCATCAAA CGCCATTCAT CTTCTATGGA AATGGCAGCG GAATGAGCGC AACGCAACTG GAAAGGCGAC AGCTTCTTTA CCGCCTCAGC AGTGGCAACC AGCTAGTGGG ATACTAATGA CTAACGACGT TGCTGAAACC AATACTACCG AGGAAGCTGT ACCTTGTTTT GCTTTATCCA AGAATGATTC ATATGTAATG TCAGCCTCCG GAGGAAAGAT CTCCTTATTT AACATGATGA CGTTTAAGAC AATGGCGACT TTTATGCCCC CACCGCCGGC TGCAACTTTT CTTGCTTTTC ATCCTCAAGA CAACAATATC ATTGCTATCG GAATGGATGA TAGCACGATT CAGATTTATA ACGTCCGTGT TGATGAGGTG AAGAGTAAGC TTAAAGGTCA TTCAAAGAGA ATAACTGGTC TTGCCTTCTC CAACGTATTA AATGTGTTGG TTTCGTCTGG AGCAGATGCA CAGCTCTGTG TTTGGAACAC AGATGGATGG GAAAAGCAGA GAAGCAAGGT TTTGCCACTT CCACAGGGAA GACCAAACAG TGCACCTTCA GATACGCGTG TTCAGTTCCA TCAAGATCAA GCTCACTTCC TCGTTGTGCA CGAGACGCAG CTCGCTATAT ACGAAACGAC CAAGCTCGAA TGCATGAAAC AGTGGGCTGT ACGAGAATCA TTAGCTCCAA TCACTCATGC CACATTCTCA TGCGATAGCC AATTGGTCTA CGCGAGTTTT ATGGATGCAA CAGTTTGTGT ATTTAGCTCT GCAAATCTAA GATTGCGTTG CCGGGTCAAC CCTTCTGCGT ATCTACCAGC TAGTCTCAGC AATTCAAACG TACATCCACT AGTGATTGCG GCACATCCGC AAGAACCAAA CATGTTTGCA GTTGGTCTCT CAGACGGGGG AGTGCACATA TTCGAACCGC TCGAGTCTGA AGGTAAATGG GGAGTCGCTC CACCTGCTGA GAACGGGTCG GCTAGCGGGG CAGCCACTGC ACCTTCCGTT GGAGCCTCTG CATCTGATCA GCCTCAGAGA TGATCTGAGC CGAGAGTCAC CTACCTCTCT GATTCCCTTT CTTCTTTTTA AAAGTCTTTC TTTTTATTTT ATTTTTTTGG TAGAAAGATT TATGACCCAA AGATTCTAAC ATTTAGATGT AACATATTAT TCACAGTAAT TCAGTAGTAA AGTTGGATAA AAACAGTGAC TGATGTTGTT TCTCTCTCTT T |
| Length | 3851 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 6348935.. 6355061 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G15750.1 |
| Description | Transducin family protein / WD-40 repeat family protein |
| TAIR curator summary | Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top half of the embryo during the transition stage of embryogenesis. It can also interact with IAA12 through the EAR domain of IAA12 and the CTLH domain of TPL. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background. |
| Alias | [TPL][WSIP1][TOPLESS][WUS-INTERACTING PROTEIN 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg890655 | TOPLESS-related 2 |
| 1.73205 |
Ahg933960 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 2.44949 |
Ahg329195 | modifier of snc1 |
| 2.82843 |
Ahg471776 | |
| 6.7082 |
Ahg485989 | delta 1-pyrroline-5-carboxylate synthase 2 |
| 7.28011 |
Ahg934736 | RING-H2 finger C2A |
| 10.8167 |
Ahg479762 | FRIGIDA-like protein |
| 10.9545 |
Ahg929203 | related to AP2 2 |
| 11.4018 |
Ahg487470 | ubiquitin-specific protease 12 |
| 12.8062 |
Ahg892011 | RING/U-box superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|