Detail



ID : Ahg471825

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471825|fgenesh2_kg.1__1779__AT1G16280.1
Sequence
ATGGAGGAAC CGAGATCGGA GGATGAAGGG GGAATCACAA TCATGGCTAA ATCCCGCAAG AATCCTAAAA CCGTAGTACA AATTCAGTCT CAGAAACTTG ATTCCGACCA GAATGCTCCT CAATTTGAGA AATTCACAAA TCCCAACCCT AGTTCCGTCG CTAATTTCGA AGGGCTCGGA TTAGCTGAGT GGGCAGTGGA AACGTGTAAA GAGCTTGGCA TGCGTAAACC GACTCCAGTT CAAACTCACT GCGTGCCGAA GATATTGGCC GGACGAGACG TTTTAGGGCT TGCTCAGACT GGTAGTGGTA AAACGGCGGC GTTTGCTCTA CCGATACTTC ACCGCCTCGC TGAAGATCCT TATGGGGTCT TCGCGCTTGT AGTGACGCCG ACTAGAGAGC TAGCGTTCCA GCTCGCTGAG CAGTTTAAAG CTTTGGGTTC GTGTTTGAAT TTGCGTTGCT CTGTAATTGT GGGAGGAATG GATATGTTGA CGCAAACGAG GAGCTTGGTT TCACGACCTC ATATCGTTAT TACTACTCCT GGGAGGATTA AGGTTTTGCT TGAAAACAAT CCTGATGTTC CTCCAGTTTT CTCTAGAACC AAGTTCTTAG TACTGGACGA GGCGGATAGA GTTCTTGATG TTGGTTTTCA AGACGAGTTG CGGACTATCT TTCAGTGTCT GCCAAAGACT AGACAAACAT TGTTGTTCTC TGCTACGATG ACTACTAACT TACAGACATT GCTCGAACAT TCTTCAAACA AAGCTTATTT CTATGAAGCA TATGAAGGCT TTAAGACTGT TGACACTCTT ACGCAGCAGT TCATTTTCGA AGACAAAGAT GCTAAAGAAC TATATCTTGT GCACATACTG TCGCAAATGG AAGATAAGGG CATTCGATCA GCCATGATTT TTGTCTCCAC TTGCAGAACA TGTCAAAGGT TAAGTCTTAT GCTTGAAGAG CTTGAAGTGG AAAACGTAGC TATGCATTCT CTGAATTCTC AGTCTATGCG ACTATCTGCA CTAAGTAAAT TCAAGTCTGG GAAAGTACCG ATATTGCTTG CGACTGATGT TGCCAGCCGT GGATTGGATA TTCCTACTGT CGACCTTGTC ATCAATTATG ACATTCCGAG AAATCCGAGG GATTATGTTC ATCGTGTTGG ACGTACAGCT AGAGCTGGTA GAGGAGGACT GGCTGTAAGC ATTATCACTG AGACCGATGT GAAACTTATC CATAAGATAG AAGAGGAAGT TGGAAAAAAG ATGGAACCGT ACAACAAAAA AATAATCACT GACAGTGTAG AAGTCACAAA GGTCTCAAAA GCCAAAAGGG TGGCAATGAT GAGGATGCTA GATAATGGAT TCGAAGACAA GGTTAAAGAC CGGAGGAAAT TGAAACGTAA AACACTTGCG GATAAAGGGT TGCTTAAGAA ACGGAGCAAA AGGCAGAAAT CAACAGAAAA TTGA 
Length1464
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6513683.. 6515709
Download Sequence
A.thaliana
AGI-codeAT1G16280.1
DescriptionRNA helicase 36
TAIR curator summary
Alias[AtRH36][RH36][SWA3][Arabidopsis thaliana RNA helicase 36][RNA helicase 36][SLOW WALKER 3]
Gene coexpression
MR
MR Locus Description
6 Ahg951457 Tetratricopeptide repeat (TPR)-like superfamily protein
8.77496 Ahg476621 plastid transcriptionally active 2
10.198 Ahg939309 RING/U-box superfamily protein
15.4272 Ahg933722 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
20.8806 Ahg315447 ILITYHIA
24.5967 Ahg496485 embryo defective 2759
24.7184 Ahg477212 tetratricopeptide repeat (TPR)-containing protein
29.3258 Ahg484399 Ribosomal protein S21 family protein
29.7993 Ahg895780 zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein
31.8904 Ahg478879 Ribosomal protein L18ae/LX family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression