Detail


ID : Ahg471905

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471905|fgenesh2_kg.1__1859__AT1G17070.1
Sequence
CTCTGATATT TTGGAAACTT TGAGGAGTTT CGGATCTAGT TTCGTCGCCA TGGACGAGTA TCAAGAGATG GAGAGATTTA GTATGGATAA TGACTACGAA GGAGGTCGAT GGGAAGGTGA CGAGTTCGTA TACGAAAAGA GGAAGGAGAA GCGGAAGCAA ACCAAAAACG ACGCTACTTA TGGAATCTTC GCTGAGAGCG ATTCGGATTC CGATGATTCT GGCGGCGGCG GCAGTCGTAG GAAGAGGCGT AAGGATCGTG ATTCGGGAAG GAATGCCGAC TTAACCAAGC CTGTCAATTT TGTATCTACA GGTACGGTTA TGCCGAATCA AGAGATTGAT AAGGATTCTA GAGAACATAA TGATGAGAAA GATAGGGATA GAATCGAAGA TAGTGATATG ATTGATGACG ATGTTGAAGT TAGAGGTGGA TTGGGTATGG GAAGCTCAGG TTTAGGGTTA GGGTTTAATG CGAATGGTTT TGATGATGAG GACAATCTCT TACCGGGTGC ATTGGGGAAG AAGATAGCTG ATGGGGCAAA GATGAGAGGG AAGGCCAAAA TGGAGAAGAG AGGTCAAGAG GGTGGTGGTG CAAAGGGAGG AAAGAAGAAT ACCTTAGGAG GTGATATAGG TAAGTTTGAG AAATCTACTA AAGGAATAGG TATGAAGCTG CTTGAAAAGA TGGGGTATAA GGGAGGTGGG CTTGGGAAGA ATCAGCAAGG TATTGTAGCT CCTATTGAAG CGCAGTTGAG GCCGAAGAAT ATGGGTATGG GGTATAATGA TTTCAAGGAA GCAAAGTTGC CTGATTTAAA CAAGGTTGAG GAGAAGAAGA TTGTTGGGGT CAGTGTCAGT GAGAATGAAC AGAGTCATGG TGATAGAGGA GGGAAAAATC TTTGGAAGAA GAAGAAGGTG AGGAAGGCAG TTTATGTCAC TGCAGAGGAG TTGTTGGAGA AGAAGCAGGA ACAGGGCTTT GGTGGTGGGC AGACCATTAT TGATATGCGA GGACCACAAG TTCGGGTTGT GACAAATTTG GAAAATTTAG ATGCAGAGGA GAAAGCAAAA GAAGCAGATG TTCCAATGCC GGAGTTACAA CACAACTTAC GCTTGATTGT TGATCTAGTT GAGCATGAAA TTCAGAAGAT TGATAGGGAC TTGAGGAATG AGAGAGAATC AGCCTTATGC TTACAGCAGG AGAAGGAGAT GCTTATAAAT GAGGAAGAGA AACAAAAAAG ACACTTAGAC AACATGGAAT ATATCGCAGA TGAAATTAGT CGAATTGAGC TGGAAAATAC GGCTGGGAAT TTGACACTGG ACTCACTTGC GAATCGTTTT GAGGACCTTC AAACATGCTA TCCTGATGAT TATAAGCTTT GTAACTTGTC CACCATTGCT TGCTCACTGG CCTTGCCTCT CTTTATTAGG ATGTTTCAGG GTTGGGACCC TCTTAGGGAT CCAGTGCATG GTCTCAAGGC TATATCTTCT TGGAGAAAGC TTTTGGAAGT CGAGGAAGAT CAAAATATCT GGGTAGTTTC AACGCCTTAT AGCCAACTAG TCTCGGAGGT AGTGTTACCT GCTGTTCGAA TAGCAGGCAT TAATACCTGG GAACCTAGAG ACCCTGAGCC GATGCTTAGA TTTTTAGAGA CATGGGAAAA TTTGCTGCCT TCATCTGTCT TGCATACGAT TTTGGACACA GTAGTGCTGC CAAAATTGTC AACTGCTGTT GAATATTGGG ATCCACGAAG GGAACTTGTT GCCATCCATG TTTGGGTTCA TCCTTGGTTG CCAATACTTG GTGAGAAGTT GGAGTTTCTT TATCAGATCA TTCAGATGAA ATTGAGTAAT GTTCTTGATG CTTGGCATCC CAGTGATTCA TCTGCGTACA CTATTCTTTC CCCATGGAAG ACCGTTTTTG ATACTTCAAG CTGGGAACAG CTTATGCGCC GTTACATAGT TCCCAAACTT CAGCTGGCTT TGCAAGAGTT TCAGATAAAC CCGGCAAACC AGAATTTAGA ACGGTTCCAT TGGGTTATGA AGTGGGCATC TGCAGTACCC ATACATATAA TGGCTGATTT GATGGGGAGG TTCTTCTTCC CCAAATGGCT GGATGTGTTG TACCTTTGGT TGCGTTCTAA TCCGGGGTTC GAAGAGATCC ACGGATGGTA TTTAGGTTGG AAAGAGTTAT TCCCGCAAGA GCTTTCAGCA AATGAGAGGA TCCGAATTCA GTTAAAGCGT GGTTTAGATA TGTTGATGGA AGCTGTTGAA GGAGTTGAAG TGTCTCAGCC ACGGGCAAGG GCAAATGAGC ATACACAGTT CGAGCCGGCT CAGGCTCAAG CTCAGGCCAA GGCTCAGATG GATAGCACTG AGGTGCTGAG TTTGAAAGAA GTGTTGGAAG TATTTGCGCA AGAGAAGGAG TTGCTGTTCA AACCTAAACC GAATAGAATG CACAATGGTC TTCAGATATA TGGGTTTGGG AATGTGAGTG TTATTATAGA CTCAGTGAAC CAGAAGCTGT TGGCTCAGAA AGATGGAGAT TGGTATCTTG TAACTCCTGA TGACTTATTA AGGATGCACA ACAATACAAC TGTTTCTGGA AAAAGATAGA TTTCGTTTCA TTTTGTATGT TTTCTGATGT ATAAACCATC TTCAATCTCA TCACATTTTG TCTCTCTATC TAAATTTCAT ATCTTTGACT ACTTCTTATA TAGATAACAA AACTCAAATA A
Length2721
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6797790.. 6800520
Download Sequence
A.thaliana
AGI-codeAT1G17070.1
DescriptionGC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain
TAIR curator summary
Alias[STIPL1][SPLICEOSOMAL TIMEKEEPER LOCUS1]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg947286 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
3.16228 Ahg481710 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
26.9815 Ahg480280 MAK10 homologue
30 Ahg490287 Kinase interacting (KIP1-like) family protein
32.3728 Ahg496442 Galactosyltransferase family protein
32.5576 Ahg353623 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
39.0768 Ahg895836 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
42.3556 Ahg490032 zinc finger (C2H2 type) family protein
45.793 Ahg951424 Tetratricopeptide repeat (TPR)-like superfamily protein
54.8635 Ahg949816 dentin sialophosphoprotein-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression