| Annotation |
|---|
| Description | jgi|Araly1|472210|fgenesh2_kg.1__2164__AT1G19850.1 |
| Sequence |
ATCCGGAACC AAAGATAGAA ACTGTGGTTT CATGATGGCA CCTTTGGTTT CTCTTCTTCA TTGAAGGGTC GAATTTAGTC TGAGAAAAGA AGAGTGGAGA GAGAGAAAGA GGAGAGGCAA GAGCCCCACA AGAGAGACAT GCTTGTCTGT GTGTAGTCCC TTTTTGTATG TTCTTTAATC TCTCCCACTC TGTTTTTGTC ATGTATAAGG GTTTTTGTCC TTCGAATTTG GAGTTTTCTT TAACCAAAAA AAACCAGATT CCATGAAATG GCTTTGTCTT TAATTCTTTT GGTTTTTCCT GGATTTATCT TCTTGTAGCC TCTTTGCTCA GTAGAGCTCT TTTGTCTCTT CTTGTGTTAA AAAAAATAAA ATGAGTCTTG CCAAAGCCTA GTGTTGAGTG TGGGAGAGAC AAACAGAACA TTGAACAATC TCTTTGTATG ATGGCTTCGT TGTCTTGTGT TGAAGACAAG ATGAAAACAA GTTGTTTGGT TAATGGAGGA GGAACAATAA CAACAACAAC AACATCTCAA TCTACTTTGC TTGAAGAGAT GAAGCTCTTG AAAGATCAGT CAGGAACAAG AAAGCCGGTA ATAAACTCGG AGCTATGGCA CGCTTGTGCA GGCCCTTTGG TGTGTCTCCC TCAAGTTGGG AGCTTAGTGT ATTACCTCTC ACAAGGTCAT AGCGAGCAGG TTGCTGTTTC AACCAGAAGG TCAGCAACAA CACAAGTTCC TAACTACCCA AACCTTCCAT CTCAGTTGAT GTGTCAAGTC CATAATGTTA CTCTTCATGC TGACAAAGAC AGTGACGAAA TCTATGCTCA GATGAGTCTT CAACCAGTTC ACTCTGAGAG AGATGTGTTC CCTGTACCAG ACTTTGGGAT GTTAAGAGGA GGAAGTAAGC ACCCGACTGA GTTTTTCTGC AAAACACTTA CTGCAAGTGA CACAAGCACA CATGGAGGTT TCTCCGTGCC ACGTAGAGCT GCAGAGAAGC TATTTCCACC ATTAGACTAC ACAGCACAGC CGCCAACGCA AGAGCTTGTA GTTCGAGATC TCCATGAGAA TACTTGGACA TTTCGCCATA TCTATCGAGG GCAACCAAAG AGACATCTCC TAACAACCGG ATGGAGTTTG TTCGTTGGAT CAAAAAGATT GAGAGCTGGG GATTCTGTTT TGTTCATCAG GGATGAAAAG TCGCAACTGA TGGTCGGTGT GAGGCGTGCC AATCGCCAAC AAACAGCACT TCCTTCATCA GTTCTCTCAG CGGATAGTAT GCACATCGGT GTTCTTGCTG CTGCTGCGCA CGCAACTGCA AACCGAACTC CTTTCTTGAT ATTCTATAAT CCAAGAGCTT GTCCAGCAGA GTTTGTGATT CCTCTAGCTA AGTACCGCAA GGCGATATGT GGGTCTCAGC TCTCAGTTGG TATGAGGTTT GGAATGATGT TTGAAACTGA AGATTCCGGG AAACGAAGGT ACATGGGAAC CATTGTTGGA ATCAGTGATC TGGATCCGTT GAGATGGCCT GGTTCTAAGT GGCGTAACCT TCAGGTGGAA TGGGATGAGC CTGGATGTAA TGATAAGCCT ACTCGGGTCA GTCCATGGGA TATCGAAACA CCTGAAAGTC TCTTCATTTT TCCTTCTCTG ACCTCAGGAC TCAAACGTCA GCTCCATCCA TCTTACTTTG CGGGTGAAAC TGAATGGGGT AGCTTGATAA AACGGCCACT TATACGTGTT CCTGATTCCG CGAACGGGAT TATGCCTTAC ACATCATTCC CTAATATGGC TTCGGAGCAG CTTATGAAAA TGATGATGAG GCCTCACAAC AACCAAAATG TACCATCTTT CATGTCTGAG ATGCAGCAGA ATGTTGTAAT GGGGCATGGA GGTTTTCTAG GAGATATGAA GATGCAGCAA CCCATGATGA TGAACCAGAA ATCTGAGATG TTGCAGCCAC AAAACAAGCT AACAGTGAAC CCATCTGCTT CTAATACGAG TGGCCAAGAA CAGAATCTGT CACAGAGTAT GAGTGCTCCT GCAAAGCCTG ACAACTCAAC ACTTTCTGGC TGCAGCTCTG GTAGAGTCGA GCATGGACTT GAGCAGTCGA TGGAACAGGC AAGCCAGGTG ACTACACCCA CAGTGTGTAA TGAGGAAAAG GTTAATCAGC TACTTCAGAA ACCGGGTTCT TCGTCTCCTG TACAAGCTGA TCCATGTCTT GACATTAGTC AACAGATTTA CCCACCACAG TCTGATCCAA TAAATGGATT CTCTTTCTTG GAAACTGATG AGCTGACATC ACAAGTGTCT TCCTTCCAGT CTCTTGCCGG ATCATACAAG CAACCATTTA TGCTATCCTC CCAGGATTCT TCAGCTGTTG GGTTACCGGA TTCAACAAAC TCACCAATGT TTCACGATGT GTGGGACAAT CAGTTGAACG GTCTCAAGTT TGACCAGTTC AGTCCCTTGA TGCAGCAGGA CCTTTATGCT AGTCAGAATA TTTGTATGAG TAATAGCACA ACCAGCAACA TTCTAGATCC TCCACTCTCA AACACAGTTC TTGATGACTT CTGTGCCATC AAGGAAACTG ATTTCCAGAA CCACCCTTCT AGTTGTTTGG TTGGAAACAA CAACACTAGC TTTGCTCAAG ATGTCCAGTC ACAGATCACA TCAGCTAGCT TTGCAGACTC ACAGGCCTTC TCTCGTCAAG ATTTTCCAGA TAATTCCGGA GGGACTGGTA CATCTTCAAG CAATGTTGAT TTTGATGATA GTAGTCTGCT GCAAAATAGT AAAGGCTCAT CATGGAAGAA AATTGCAACA CCCCGCGTCC GAACCTACAC TAAGGTTCAA AAAACCGGGT CAGTAGGGAG GTCAATTGAT GTCACAAGCT TCAAAGACTA CAAGGAGCTA AAATCTGCAA TCGAGTGCAT GTTTGGATTG GAAGGACTAC TCACTCGGCC ACAAAGCTCG GGTTGGAAGC TTGTATATGT TGATTATGAG AGTGATGTTC TACTTGTAGG AGATGATCCA TGGGAAGAGT TTGTGGGATG CGTTAGGTGC ATAAGGATAC TATCGCCAAC AGAGGTCCAG CAGATGAGTG AAGAAGGGAT GAAGCTTTTG AACAGCGCGG GCATTAACGA TCTTAAGACT TCTGTTTCAT AAATGTAGCA ATATAAAAAT GATCTCCTGC TGATTTGTAA GAAAAAAAAG AGAGTAAGAA ACTGTTCTTC TCTCGAACTG GTAGAGGAGA AACCTTCTTG TTGTAGCATT TGATGTGTTG TTCCCATTTG AGACCTGAAA CTAAACTATA TTCATATATG TAGTAGAGTG ATGAATGAAT CAGTAGTTGA GACAGT |
| Length | 3346 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 8073697.. 8078204 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G19850.1 |
| Description | Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related |
| TAIR curator summary | Encodes a transcription factor (IAA24) mediating embryo axis formation and vascular development. Similar to AUXIN RESPONSIVE FACTOR 1 (ARF1) shown to bind to auxin responsive elements (AREs), and to the maize transcriptional activator VIVIPAROUS 1( VP1). In situ hybridization shows expression in provascular tissue of embryos, the emerging shoot primordia, then is restricted to provascular tissue, and in the root central vascular cylinder. |
| Alias | [ARF5][IAA24][MP][AUXIN RESPONSE FACTOR 5][indole-3-acetic acid inducible 24][MONOPTEROS] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.31662 |
Ahg934932 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 3.60555 |
Ahg481915 | transducin family protein / WD-40 repeat family protein |
| 4.89898 |
Ahg475340 | Major facilitator superfamily protein |
| 21.0713 |
Ahg493625 | IQ-domain 33 |
| 21.6333 |
Ahg941349 | RING/U-box superfamily protein |
| 27.5681 |
Ahg485480 | Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) |
| 29.8329 |
Ahg477783 | acyl carrier protein 1 |
| 31.9374 |
Ahg477790 | |
| 32.8634 |
Ahg483391 | Phosphoribosyltransferase family protein |
| 37.6829 |
Ahg491155 | RAC-like 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
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| Growth Chamber expression |
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