| Annotation |
|---|
| Description | jgi|Araly1|472559|fgenesh2_kg.1__2513__AT1G23080.1 |
| Sequence |
AAAAATCATC AAATCTTCTC CTTCTTCTCT CTCTCTCACA CACTCACTAG CTTCTCTGTT AAAAGCTTCC GTCATCACAC AGAGCACATA GACTGACACT AACTCACTTC CTAACGGTTT CCACACTCAA AATTACACTT TTGCCACTCC GGCCCTCAAC AATGATCACA TGGCACGACC TCTACACAGT CCTCACGGCG GTGATACCAC TCTACGTAGC CATGATCCTC GCTTACGGCT CCGTCCGGTG GTGGAAAATT TTCTCACCAG ACCAATGCTC CGGCATAAAC CGCTTCGTCG CCATTTTCGC TGTCCCTCTC CTCTCTTTCC ACTTCATCTC CTCCAACAAC CCATACGCAA TGAATCTCCG ATTCATCGCC GCCGATACAC TCCAAAAACT AATCATGCTC ACTCTCCTAA TCATCTGGGC TAACTTCACT CGCTCCGGTA GTCTCGAATG GAGCATCACA ATCTTCTCTC TTTCAACACT TCCCAACACT CTCGTTATGG GAATACCTCT CTTGATCGCC ATGTACGGCG AATATTCCGG CTCACTCATG GTTCAGATCG TTGTTCTTCA GTGTATAATA TGGTACACGC TTCTTCTCTT TCTTTTCGAA TACAGAGGAG CTAAGATCTT GATCATGGAA CAGTTCCCAG AGACTGGTGC TTCGATTGTA TCATTCAAAG TTGAGTCCGA TGTTGTTTCT TTAGACGGAC ATGATTTTCT TGAAACTGAT GCTCAAATCG GTGACGATGG TAAGCTTCAT GTTACGGTGA GGAAATCAAA CGCTTCTCGG AGATCTTTTT ACGGTGGTGG TGGTACTAAT ATGACTCCTC GTCCGTCGAA TCTCTCCGGA GCTGAGATTT ATAGTCTTAA CACTACTCCG AGAGGATCTA ACTTCAATCA TTCTGATTTT TACTCTATGA TGGGATTTCC CGGTGGCCGG CTTTCGAACT TTGGTCCGGC GGATATGTAC TCTGTTCAGT CCTCGAGAGG GCCTACTCCT AGACCTTCGA ATTTTGAGGA GAATTGTGCT ATGGCTTCTT CGCCTAGATT CGGGTATTAC CCGGGAGCTC CTGGGTCGTA CCCAGCTCCG AATCCGGAGT TTTCTACTGG TAATAAAATT CCAAAAGAGA ATCACCATCC TGTCGGAAAA TCGAATAGTC ATGATGCTAA GGAGCTTCAT ATGTTTGTTT GGGGATCTAA CGGGTCACCC GTTTCGGACC GAGCGGGTCT TCAAGTTGAT ACTGCAGCCA ATGAACAAGT CGGAAAATCG GATCAAGGCT GTGCCAAAGA GATTCGAATG TTGATCTCTG ATCCTACTCA GAACGGTGAA AACAAAGCTG GTCCGATGAA CGGAGACTAT GGTTGCGAAG AAGAGTTGGA GAGAGTCAAG GAAGTGCCTA ACGGACTACA CAAGCTTCGG TGTAACTCAA CGGCGGAGCT AAACCCTAAA GAAGCTATAG AAACCAGTGA AACTGTACCG GTAAAACATA TGCCGCCGGC AAGTGTGATG ACTCGGCTGA TATTGATAAT GGTGTGGAGG AAACTGATAA GGAACCCAAA CACTTACTCT AGTCTCATTG GTCTGATTTG GGCTCTTGTC GCGTTCAGGT GGGATGTGGC AATGCCTAAA ATCATTCAAC AATCAATCTC AATTCTTTCT GATGCTGGTC TTGGTATGGC AATGTTCAGT TTGGGGTTGT TCATGGCATT GCAACCTAAA TTAATTGCTT GTGGAAATTT GACGGCCACT TTTGCAATGG CGGTGAGATT CTTTACTGGA CCAGCGGTGA TGGCCGTAGC AGCAATGGCT ATCGGATTAC GTGGAGACCT ATTGCGTGTG GCCATTGTTC AAGCTGCATT GCCTCAAGGG ATCGTGCCGT TTGTGTTTGC AAAAGAGTAT AACGTTCATC CCGCAATCTT GAGTACAGGG GTAATATTCG GAATGCTTAT CGCACTACCG ATCACACTTG TTTACTACAT TTTACTCGGG CTATAAGCTC TGTAATGGAG GAGTTCCGCT TGGCTGAAGA GGATAAAGAG AAGCAAGATA ATTCATCCAA GATTAGTGGA ACGCAACTAG CAAATGTAAT GTAACACGAG ATTTAGTAAA AAATTAAAGC GACCAAGATT TGATTTGAGG ATCCAAAAAC GCTTTTCTTG TCTATATATC TTCTAGAGAT TACTTGAG |
| Length | 2198 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 9702439.. 9705440 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G23080.1 |
| Description | Auxin efflux carrier family protein |
| TAIR curator summary | Encodes a novel component of auxin efflux that is located apically in the basal cell and is involved during embryogenesis in setting up the apical-basal axis in the embryo. It is also involved in pattern specification during root development. In roots, it is expressed at lateral and basal membranes of provascular cells in the meristem and elongation zone, whereas in the columella cells it coincides with the PIN3 domain. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. PINs are directly involved of in catalyzing cellular auxin efflux. |
| Alias | [ATPIN7][PIN7][ARABIDOPSIS PIN-FORMED 7][PIN-FORMED 7] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4 |
Ahg941765 | Stress responsive A/B Barrel Domain |
| 11.1355 |
Ahg495136 | Heavy metal transport/detoxification superfamily protein |
| 11.5326 |
Ahg483695 | Protein kinase superfamily protein |
| 11.6189 |
Ahg477915 | Heavy metal transport/detoxification superfamily protein |
| 12.9615 |
Ahg921711 | microtubule-associated proteins 70-2 |
| 13.4164 |
Ahg480558 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
| 15 |
Ahg487992 | ARM repeat superfamily protein |
| 15.6525 |
Ahg492673 | Peroxidase superfamily protein |
| 17.6068 |
Ahg485826 | |
| 18.9737 |
Ahg482819 | Transmembrane amino acid transporter family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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