Detail


ID : Ahg472791

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472791|fgenesh2_kg.1__2745__AT1G26260.3
Sequence
ATGGACGAGT TTGCCGCAAA GAAGAAGGAT TTGGTCAATA CGCCAGTGGA TTTGTATCCT CCGGAGAATC CAATGTCGGG TCCTTCTCAG ATGATGGATT CATTCAGAGA AACTCTTTGG CATGATGGTG GTTTCAATGT CCACACAGAT GCAGGCACTT CCTTTAGAGA ATCAGCTGGC TTGTTTCTTC AAGATACAAT GATTCCTAGT GGATCCAAAC TAGATAATGG TTCTCTTAAG GATGCATCTA AGTTGGTGAA AGACAGATCG ATTAATGTAT CAGATGATTC TCAATCTAGT GGAGGTAATG GTCATGATGA TGCTAAATGT GGGGTAACAT CTTCCAAGGG GTTTAACAGT AAGAAGAGGA AAAGAATTGG GAAGGATTGT GAAGGAGAAG AAGATAAAAT GCAGAAGGAT GAGCAAAGTC CAAATTCAAA TGCTAACAAG ACAAACAGTG AGAAACAAGC TTATGATTCT TTAAAGGATG GGTATATTCA CATGAGGGCA CGGAGAGGCC AGGCTACTAA TAGTCACAGT CTTGCAGAAA GAGTAAGGAG AGAAAAAATC AGTGAAAGGA TGAAGTTCTT GCAAGATCTT GTACCGGGTT GCGACAAGGT GACTGGGAAG GCAGTTATGC TCGACGAAAT CATTAACTAT GTGCAATCAC TTCAATGCCA GATCGAGTTT TTATCGATGA AACTTTCGGC TGTGAATCCT GTGCTCGATT TTAACCTCGA AAGCCTCCTT GCAAAAGATG CTCTTCAATC ATCTGCACCG ACATTTCCCC AAAACATGTC GATGCTTTAT CCTCCTCTAT CATATCTCTC TCAAACAGGA TTCATGGAAC CCAACCGTTC CTCAATGTCG CTATTGAATG GGGGATTAAA ACGGCAGGAA ACACATGGAT ACGAAAGTGA TCACCACAAT GTTGTCCACA TGAACCATGA AACTGGCACT GCACCTGATC ATGAAGACGC AACAGGTGAA AGTAAAAGCC CTATACTTTC CTACTGTTGT AACCAGATAC TTAAAAACCG CTAAGAAGGT GGAGCCGTAG ATGGTTCTTC TTCACTTTGT ACTCAGCTGT AGCTGCGGTC GAGAATTTTA TTAACTTTGA ACAGAAGAAT GAAAAACAAA CAGAGGAGGA AGCAGATCTT GTCTTTCTAA TATTAACAGC TCCGGGAGAA AGAGTCGAGA GTAAGAATCA ACAATGTTGT GTACTGAATA GCTACTGTCT GCTTCTTTTG TGTACATATA AATCCATGTT AGCTCTACTT GGCAACC
Length1287
Protein Sequence
Protein Residue
Map Locationscaffold_1: 10850327.. 10852378
Download Sequence
A.thaliana
AGI-codeAT1G26260.1
Descriptioncryptochrome-interacting basic-helix-loop-helix 5
TAIR curator summaryEncodes CIB5 (cryptochrome-interacting basic-helix-loop-helix). Related to CIB1 (AT4G34530). CIB5 interacts with CRY2 and forms heterodimer with CIB1 in vitro. Regulates flowering time redundantly with CIB1.
Alias[CIB5][cryptochrome-interacting basic-helix-loop-helix 5]
Gene coexpression
MR
MR Locus Description
14.2829 Ahg482282
26.0768 Ahg490145 Vacuolar protein sorting-associated protein VPS28 family protein
67.5574 Ahg924037 Galactose oxidase/kelch repeat superfamily protein
92.9516 Ahg475258 NAD(P)-linked oxidoreductase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression