Detail



ID : Ahg472970

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472970|fgenesh2_kg.1__2924__AT1G27660.1
Sequence
TCATCTTTCT TTACACACAC ACACACATAT ACACAGATAC AGAGATCAGA TATACTACAA ATACCTATAT ATATATATCA TCATCATATC TCTCATACGT ACATGGACTC TGCTAATCTC CATCAGCTTC AAGATCAATT ACAGCTTGTG GGGTCTTCTT CATCTTCTTC TTCCTTAGAT AATAACTCTG ATCCTTCTTG CTATGGAGCT TCCTCTGCTC ATCAATGGAG CCCAGGAGGT ATTTCTTTGA ATAGTGTGAG CTTGAGTCAT AACTATAACA ATGAGATGTT AAACACAAGA GATCACAACA ACAACACAAG TGAGTGTATG AGTCTCTCCA CCATCCACAA TCACTCCTTG ATCCAACAGC AAGACTTTCC TTTACAATGG CCTCATGACC AATCTTCATA TCATCATCAT GAAGGACTTC TCAAGATCAA AGAAGAGCTT TCCTCATCAG CTATCTCAGA CCATCAAGAA GGCATATCCA AGTTCACAGA CATGTTAAAC AGTCCAGTGA TCACAAACTA TTTGAAGATC AATGAACATA AGGACTACAC AGAGAAGCTT CTTCTAAAGA GTATGTCTTC TGGTTTCCCC ATCAGTGGAG ATTATTGTAG CAGCCTTCCC TCTTCTTCTT CTTCCTCTTC GCCTTCGTCT CAGTCTCATA GAGGCAATTT CAGTCAGATT TACCCAAGCG TAAACATATC GAGCTTGAGC GAGTCTCGGA AGATGAGCAT GGACGACATG AGTAACATCC CAAGACCATT TGATATGAAC ATGCAGGTTT TTGATGGAAG ATTGTTTGAA GGGAATGTCT TAGTTCCTCC TTTGAATTCT CAAGAGATTA GCAATCTTGG GATGAGCAGA GGAAGCTTTC CTCCTTTTGG CCTCCCTTTT CATCATCATC TGCAGCAAAC ACTTCCCCAC CCTTCTTCTT CCCCTACTCA TCAAATGGAA ATGTTCAGCA ATGAATCTCA AACAAGTGAA GGGAAGAGAC ATAACTTCTT GATGGCAACA AAGGCAGGCG AAAATGCTTC CAAGAAACCG CGCGTGGAAT CACGCTCCTC TTGCCCACCC TTCAAGGTGA GGAAAGAGAA GTTAGGAGAC AGAATAGCAG CTCTGCAGCA GTTGGTTTCA CCCTTTGGAA AGACAGATAC AGCATCTGTG TTAATGGAGG CAATTGGATA CATCAAATTC CTACAGAGCC AGATTGAGAC TTTAAGCGTC CCCTACATGA GAGCATCTAG GAACCGAACC GGAAAAGCCT CCCAGCTGGG CTCACAATCA CAAGAAGGGG ATGAAGAAGA GACGAGGGAT CTAAGAAGCC GTGGGCTGTG TCTAGTGCCG TTATCATGCA TGACTTATGT TACCGGAGAT GGTGGGGACG GAGGAGGCGG TGTTGGTAGT GGGTTTTGGC CAACGCCACC TGGTTTTGGT GGCGGAACTT AGCCGTGGAC TTAACAAACC GTAGGACTAT GCATGAGTAC ATTTATGGGA TTTGGAGGTA GAGAAAGGGA AGAAATATTG AAGGCGGAGT ATTAGTTCTT TAATTTCTTT GTTTTGGTTT ATTAATTGAA TGTTTCGGTT TTGATAGTGG AGCAAAGTTG GTCGTCCTGA TTAGAAAGAA GAATTACAGG ATAGACCAGC TTTGATCCAT TTATGATTAG TAATGAGTGA GACTTGACGA TATGTTTCTA CTTACATGAA GGGCCGTGGG AGCTAAATAA AATATCAAAT AGCTTTGTAT TATTTTGTTA AATCTCTTTT GTAGATA 
Length1777
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11537239.. 11541635
Download Sequence
A.thaliana
AGI-codeAT1G27660.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.32456 Ahg919783 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
7.14143 Ahg895327 cysteine-rich RLK (RECEPTOR-like protein kinase) 33
12.8062 Ahg946315 receptor like protein 51
13.6382 Ahg944085 GRAS family transcription factor
20.0749 Ahg478905 Plant protein of unknown function (DUF641)
23.2379 Ahg476978
27.4226 Ahg493792 GRAS family transcription factor
27.7489 Ahg490995 ubiquitin-conjugating enzyme 17
28.5657 Ahg919570 DNA polymerase epsilon catalytic subunit
36.4829 Ahg496986 Chalcone-flavanone isomerase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression