| Annotation |
|---|
| Description | jgi|Araly1|473053|fgenesh2_kg.1__3007__AT1G28380.1 |
| Sequence |
ACCGTTGACC ACTTCAATGG CTTCGCGCTC GCCTTCTTCT TCTTCTTCAC CACACAAAGC CACAATCTTT TGAATTTTCC TCATCATCAT CATCTCTCTC TCCGATCCAT GGCCTTTAAC AATTTCACAC GCCTCGATGC TCAATCCGCC GCCGTGAAAG CCGTCTCAGT GATCGGATTA GGTTACGATC TCTGCTCCGA TGTTCGTTTC TCCGCTTGTA AAACCACACC TGACGGTTCC AGGTTAGTCG AAATCGACCC GACCCGGAAC CGTGACTTAG TCTTCCCCGG TGGGATCGTC GTTAATAACG TCTCGAGCTC GATTAAGTGC GATAAAGGCG AACGTACTCG ATTACGCTCC GATATACTCT CTTTTAATCA GATGTCGGAG AAGTTTAATC AAGATATGTG TCTCTCCGGG AAGATTCCGT CGGGGATGTT TAATAATATG TTTGCGTTTA GTAAATGTTG GCCAAAAGAT GCGAGCTCTG TCAAGAATTT AGCTTATGAT GGTTGGTTCA TTAGCTTGTA TAGTGTTGAG CTTGTTAGGA AGCAATTGAC GTTACGTGAT GAAGTGAAAC GTGAGGTTCC TTCTTCTTGG GACTCTGCTT CACTTGCTGG GTTTATTGAG AAATATGGTA CTCATGTAGT TGTTGGAGTG ACTATGGGAG GTAAAGATGT CATTCATGTG AAGCAGATGC GTAAATCGAA TCACGAACCT GATGAAATTC AGAAATTGTT GAAGCGTTGG GGTGATGATA GATTTTGTGT TGATCCTGTT GAAAGTAGAT CTCCTGCTTC TGTTTATTCC GGGAAGCCAA AGGAGGAGAA TCTTCATCAA TGGGGACTTC AACCGTTTGG TACCTCGGTT AGCTCTGCTG TTGTCACGCA CACCAAGAAC GAGGAGATTG TGAGGGTTTG TATCAGAAGA GGAGGTGTTG ATCTGGGGCA AAGTCATGAA CGATGGCTCT CAACAGTATC ACAATCACCC AACGTCATAT CCATGTGTTT TGTTCCTATA ACTTCACTCT TGAGCGGTCT CCCAGGAACA GGATTTCTTA GTCATGCAGT GAACTTATAC CTCCGATATA AGCCACCGAT AGAAGAGTTG CATCAATTTC TTGAGTTTCA ACTTCCACGC CAATGGGCTC CGGTGTATGG AGATCTCCCT CTTGGACTAC GCCGCTCAAA ACAAAGTTCT CCATCCCTTC AGTTCTCTTT GATGGGTCCA AAACTATACG TCAACACATC AAAGGTTGAT TCAGGTGAGC GACCAGTAAC CGGACTACGC TTCTTCCTTG AGGGGAAGAA AGGAAATCAT CTAGCTATAC ATTTGCAGCA CCTCTCTGCA TGTCCTCCAA GTCTCCATCT CTCACACGAT AAAACCTATG AACCCATCGA TGAACCACCT GAAAAAGGGT ATTATGTACC TGTGAAATGG GAAATATTCT CACATGTTTG CACCTTCCCA GTTCAGTACA ACGGAGCACG GTCTGATGAA ACCGCCTCTA TCGTAACCAA AGCCTGGTTA GAAGTCAAAG GAATCGGGAT GAGGAAAGTT CTCTTCTTGA GGCTCGATTT CTCGCACGAT GCTTCAGCTG TTACACGTAA ATCGTGCTGG GATAATCTTT CAGCAAACTC GCGCAAATCG GGTGTTTTCT CGATGATTAG TACAAGATTA AGCACGGGTT TAAGTCCAAA CCCGGCAACA ACGAAGCCAC AGTCTAAGAT TGATATAAAC TCTGCGGTGT ATCCTAGAGG GCCATCGCCG CCTGTGAAAC CAAAGCTGCT GAGTCTTGTA GACACGAAGG AGGTGATGAG AGGTCCAGAG GAACAACCTG GATATTGGGT TGTGACTGGG GCTAAACTTT GTGTTGAGGC AGGGAAGATC TCAATCAAAG CTAAATACTC TCTGCTTACT GTCATATCGG AAGACTCGCT GGTCTGAGAG TTTCATTCAT TGAGTTCCGA AGGACAGGGA GGGGTGTCTA TGTGAGGAAC ACAAGTGTAG TGTGTGTGTG TTGGCTTTTT GCAGGTTTCA GTTTGTGATT AGCTTTAATC AGGTGTTTTT GGTTTGTGAA CAAAATTTAT TTATCTGTTG ATGTAAATGT TTCGTTGTAT ATGATGTTTA TTTTACATAA TAGTATATGT ATTCGTGTAG AACATATTTG AATGAAACTG AACCGGCTTC GTTTTTGTTC TCCTT |
| Length | 2205 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 11911977.. 11914689 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G28380.1 |
| Description | MAC/Perforin domain-containing protein |
| TAIR curator summary | This gene is predicted to encode a protein involved in negatively regulating salicylic acid-related defense responses and cell death programs. nsl1 mutants develop necrotic lesions spontaneously and show other features of a defense response, such as higher levels of SA and disease resistance-related transcripts, in the absence of a biotic stimulus. The NSL1 protein is predicted to have a MACPF domain, found in proteins that form a transmembrane pore in mammalian immune responses. NSL1 transcript levels do not appear to change in response to biotic stresses, but are elevated by cycloheximide in seedlings, and by sodium chloride in roots. |
| Alias | [NSL1][necrotic spotted lesions 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.48074 |
Ahg470124 | Protein of unknown function (DUF793) |
| 11.6619 |
Ahg475187 | S-locus lectin protein kinase family protein |
| 14.8324 |
Ahg485608 | syntaxin of plants 122 |
| 16.4924 |
Ahg902826 | glutathione S-transferase phi 8 |
| 17.3205 |
Ahg477807 | RING/U-box superfamily protein |
| 18.7083 |
Ahg940372 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
| 25.6905 |
Ahg493778 | DCD (Development and Cell Death) domain protein |
| 31.3688 |
Ahg929287 | Protein of unknown function, DUF584 |
| 32.1248 |
Ahg941373 | Plant protein of unknown function (DUF946) |
| 35.6651 |
Ahg481938 | WRKY DNA-binding protein 25 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
|
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| Growth Chamber expression |
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