Detail



ID : Ahg473203

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473203|fgenesh2_kg.1__3157__AT1G29910.1
Sequence
ACTCTCACTC ACAAGTTAGT CACCAAAAAA AAAAAAACAC AAAAAATTTT CAATGGCCGC CTCAACAATG GCTCTCTCCT CCCCTGCCTT CGCCGGAAAG GCTGTGAACC TTTCCCCCGC GGCATCAGAA GTCCTTGGAA GCGGCCGTGT GACAATGAGG AAGACTGTTG CCAAGCCAAA GGGTCCATCA GGCAGCCCAT GGTACGGATC TGACCGTGTC AAGTACTTGG GCCCATTCTC TGGCGAGCCA CCGAGCTACC TTACCGGAGA GTTCCCCGGA GACTACGGAT GGGACACCGC CGGACTCTCA GCCGACCCCG AGACATTCGC AAGGAACCGT GAGCTAGAAG TTATCCACAG CAGGTGGGCC ATGCTCGGAG CCCTAGGCTG CGTTTTCCCT GAGCTTTTGG CCAGGAACGG AGTCAAGTTC GGAGAGGCCG TTTGGTTCAA GGCCGGTTCA CAGATCTTCA GCGATGGAGG GCTCGATTAC TTGGGAAACC CTAGCTTAGT CCACGCTCAG AGCATCTTGG CGATTTGGGC CACTCAAGTT ATCTTGATGG GAGCCGTTGA AGGCTACAGA GTCGCAGGAA ATGGGCCATT GGGAGAGGCC GAGGACTTGC TTTACCCCGG TGGTAGCTTC GACCCATTGG GTTTGGCTAC CGACCCAGAG GCCTTCGCTG AGTTGAAGGT GAAGGAGCTC AAGAACGGAA GATTGGCTAT GTTCTCTATG TTTGGATTCT TCGTTCAAGC CATTGTCACT GGTAAGGGAC CGATAGAGAA CCTTGCTGAC CATTTGGCCG ATCCAGTTAC CAACAACGCA TGGGCCTTCG CCACCAACTT TGTTCCCGGA AAGTGAGCCA AGTTTTATCC GTTTGTAATT TGCTTTTTTC AATCTTTTGA ATTCGAGTGA GAGACAGGAG GAGAAAGAGC AGGTTTGTGT TTGTGATGGA TGGTTTGAGA CTTTCAATGT AAATTTGCAA GACTTTGTAT GATTTGTCAT TAATCAAA 
Length1008
Protein Sequence
Protein Residue
Map Locationscaffold_1: 12504098.. 12505133
Download Sequence
A.thaliana
AGI-codeAT1G29920.1
Descriptionchlorophyll A/B-binding protein 2
TAIR curator summaryEncodes lhcb1.1 a component of the LHCIIb light harvesting complex associated with photosystem II.
Alias[AB165][CAB2][LHCB1.1][chlorophyll A/B-binding protein 2][LIGHT HARVESTING CHLOROPHYLL A/B-BINDING PROTEIN 1.1]
Gene coexpression
MR
MR Locus Description
1 Ahg473204 chlorophyll A/B binding protein 1
1.73205 Ahg482403 light-harvesting chlorophyll-protein complex II subunit B1
2 Ahg930834 photosystem II light harvesting complex gene 2.1
5 Ahg482401 photosystem II light harvesting complex gene B1B2
5.09902 Ahg490641 proline-rich protein 4
5.2915 Ahg495512 light-harvesting chlorophyll B-binding protein 3
7.48331 Ahg478197 light harvesting complex photosystem II
8.48528 Ahg485112 light-harvesting chlorophyll-protein complex I subunit A4
9.16515 Ahg492051 protochlorophyllide oxidoreductase B
10.9545 Ahg930186 cell wall-plasma membrane linker protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression