Detail



ID : Ahg473204

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473204|fgenesh2_kg.1__3158__AT1G29930.1
Sequence
ACCCATTTCT TGGCTTACAA CAACAACTCT TAAACGTTTT ACTTTGTGCT ACACTCAACC TCAATGGCCG CCTCAACCAT GGCTCTCTCC TCCCCTGCCT TCGCCGGAAA GGCCGTCAAG CTTTCCCCCG CGGCATCAGA CGTCCTTGGA AGCGGCCGTG TGACAATGAG GAAGACAACT GCCAAGCCAA AGGGCCCATC AGGCAGCCCA TGGTACGGAT CTGACCGTGT CAAGTACTTG GGCCCATTCT CTGGCGAGCC ACCGAGCTAC CTTACCGGAG AGTTCCCCGG AGACTACGGA TGGGACACCG CCGGACTCTC AGCCGACCCC GAGACATTCG CAAGGAACCG TGAGCTAGAA GTTATCCACA GCAGGTGGGC CATGCTCGGA GCCCTAGGCT GCGTTTTCCC TGAGCTTTTG GCCAGGAACG GAGTCAAGTT CGGAGAGGCC GTTTGGTTCA AGGCCGGCTC TCAGATCTTC AGCGATGGAG GGCTCGATTA CTTGGGAAAC CCTAGCTTGG TCCACGCTCA GAGCATCTTG GCGATTTGGG CCACTCAAGT TATCTTGATG GGAGCCGTTG AAGGCTACAG AGTCGCAGGA AATGGGCCAT TGGGAGAGGC CGAGGACTTG CTTTACCCCG GTGGTAGCTT CGACCCATTG GGTTTGGCTA CCGACCCAGA GGCCTTCGCT GAGTTGAAGG TGAAGGAGCT CAAGAACGGA AGATTGGCTA TGTTCTCTAT GTTTGGATTC TTCGTTCAAG CCATTGTCAC TGGTAAGGGA CCGATAGAGA ACCTTGCTGA CCATTTGGCC GATCCAGTTA CCAACAACGC ATGGGCCTTC GCCACCAACT TTGTTCCCGG AAAGTGAGCC AAGTTTTTAT CTGTATTTTG CTTCAGTCTT TGCTTCGTGT GAGTGAGAGG AGAAAGAGAG GTTGTATAGA TGTAAAATTT GCAAGACTTT GTGTAATTTT TCATTAATCA AATAACTCGT TTTTCTCTCA AA 
Length1002
Protein Sequence
Protein Residue
Map Locationscaffold_1: 12507151.. 12508152
Download Sequence
A.thaliana
AGI-codeAT1G29930.1
Descriptionchlorophyll A/B binding protein 1
TAIR curator summarySubunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.
Alias[AB140][CAB1][CAB140][LHCB1.3][chlorophyll A/B binding protein 1][CHLOROPHYLL A/B PROTEIN 140][LIGHT-HARVESTING CHLOROPHYLL A/B-PROTEIN 1.3]
Gene coexpression
MR
MR Locus Description
1 Ahg473203 chlorophyll A/B-binding protein 2
2.82843 Ahg482403 light-harvesting chlorophyll-protein complex II subunit B1
3.60555 Ahg490641 proline-rich protein 4
4.24264 Ahg930834 photosystem II light harvesting complex gene 2.1
4.3589 Ahg930186 cell wall-plasma membrane linker protein
4.69042 Ahg492051 protochlorophyllide oxidoreductase B
6.63325 Ahg495512 light-harvesting chlorophyll B-binding protein 3
6.7082 Ahg482401 photosystem II light harvesting complex gene B1B2
6.9282 Ahg940828 magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
8.94427 Ahg945300 early nodulin-like protein 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression