| Annotation |
|---|
| Description | jgi|Araly1|473228|fgenesh2_kg.1__3182__AT1G30100.1 |
| Sequence |
GCTCTCATGG CTTGTTCTTA CGTATTAACA CCAAACCCAA CCAAACTCAA TCTCTCCTTT GCTCCCTCCG ATCTCGACGC TCCTTCGCCT TCATCCTCCG TTAGTTTCAC CAACACTAAA CAAAGACGTC GTAAACTCTC CACAAACTCC GTCTCCGACA CTCCAACTTT ACTGAATTCC CCAAACTACC CTTCTCCAAA CCCCATGATT CCCGAAAAGG ACAGTTCCCG TTGGAACCCT CTCCAACGCG CCGCCTCCGC CGCACTCGAC TTCGCCGAAA CCGCATTGGT AAGACGCGAA CGTTCTAAAC CTCTCCCTAA AACCGTTGAT CCTCGCCATC AGATCTCCGG CAACTACGCT CCGGTGCCGG AACAATCCGT TAAATCATCT CTCTCCGTTG ACGGAAAAAT CCCTGAATGC ATTGACGGTG TTTATCTCCG TAACGGTGCT AATCCACTCT TTGAGCCAGT TTCTGGTCAT CACCTATTCG ACGGTGACGG TATGGTTCAC GCCGTTAAAA TCACTAACGG TGACGCGAGT TACTCGTGCC GGTTTACGGA AACCGAGAGA TTGGTTCAAG AGAAACAACT CGGTTCTCCG ATTTTTCCTA AAGCCATTGG TGAGCTACAC GGTCACTCCG GCATCGCACG GTTGATGCTA TTTTACGCAC GTGGTTTATT CGGTTTATTA AATCACAAAA ACGGAACCGG AGTTGCTAAC GCCGGTTTGG TTTATTTTCA CGACCGGTTA TTAGCTATGT CTGAAGACGA TTTACCTTAC CAAGTTCGTG TCACCGACAA TGGCGATTTA GAGACGATCG GAAGATTCGA TTTCGACGGA CAATTAAGCT CCGCCATGAT CGCTCACCCG AAGATTGATC CAGAGACGAA GGAGCTATTC GCGTTGAGCT ACGACGTCGT TAAGAAACCG TATTTGAAAT ACTTCAGATT CTCGCCGGAA GGTGAGAAAT CGCCAGACGT GGAGATTCCT CTTGCGAGTC CAACGATGAT GCACGATTTC GCGATCACTG AGAAATTCGT CGTGATTCCG GATCAACAAG TGGTATTTAA ACTCTCCGAT ATGTTTCTTG GGAAATCTCC GGTTAAATAC GACGGAGAGA AAATTTCCCG ATTTGGAATT TTGCCCAGAA ACGCTAAAGA TGCGTCGGAG ATGGTTTGGG TCGAGTCGCC GGAAACGTTC TGTTTCCATC TTTGGAACGC TTGGGAATCG CCGGAGACCA ATGAGGTTGT GGTGATTGGA TCTTGCATGA CTCCGGCGGA TTCGATCTTC AACGAGTGCG ATGAGCAACT CAACAGTGTT TTATCGGAGA TCCGGTTAAA TCTCAAAACC GGAAAATCCA CACGCAGAAC TATAATTCCC GGTTCGGTTC AGATGAATCT TGAAGCTGGT ATGGTAAACC GGAATCTTCT TGGGAGGAAA ACCCGGTACG CGTACCTAGC GATAGCTGAA CCGTGGCCTA AAGTCTCAGG ATTTGCAAAA GTGGACCTTT CTACCGGAGA AGTGAAAAAT CATTTTTACG GCGGTAAAAA ATACGGTGGT GAACCTTTTT TCTTACCGAG AGGGTTAGAA TCTGACGGAG AAGATGACGG TTACATTATG TCGTTTGTTC ATGATGAGGA GAGTTGGGAA TCGGAGCTTC ATATTGTTAA CGCCGTTACG TTGGAACTAG AAGCAACCGT TAAATTGCCG TCAAGAGTAC CGTATGGTTT CCACGGCACT TTCGTGAATT CGGCGGATAT GTTAAACCAG GCTTAGTAAA CCGAATCCGG TTCAGGTTTG GTTTATTGTG CAGAGGCAGA TTTTTGTGAA TACAAAATAG TCTTTGTTTT CCCGAAGCGG TGGGAGCCAG CTTGAAGCTT GTGTAAGTAG AAGTTTTGCT AAGCTCAGCT GGTTTCTGTT GCATTTTTTT GTGGTGTATT AATAA |
| Length | 1945 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 12647415.. 12649399 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G30100.1 |
| Description | nine-cis-epoxycarotenoid dioxygenase 5 |
| TAIR curator summary | Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition. |
| Alias | [ATNCED5][NCED5][NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5][nine-cis-epoxycarotenoid dioxygenase 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 17.8326 |
Ahg929555 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| 25.807 |
Ahg329088 | OSBP(oxysterol binding protein)-related protein 4B |
| 26.0384 |
Ahg482783 | NAD(P)-linked oxidoreductase superfamily protein |
| 52.3355 |
Ahg487521 | sulfotransferase 2A |
| 57.4891 |
Ahg325029 | homeobox 51 |
| 64.0625 |
Ahg472335 | transposable element gene |
| 65.1767 |
Ahg919141 | Major facilitator superfamily protein |
| 69.3974 |
Ahg942310 | Hypoxia-responsive family protein |
| 71.7496 |
Ahg479923 | glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases |
| 83.9762 |
Ahg316746 | Arabidopsis thaliana gibberellin 2-oxidase 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|