Detail



ID : Ahg473307

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473307|fgenesh2_kg.1__3261__AT1G30760.1
Sequence
ATGGCGTTTA CGTTAATAAT TATTAACGCA AACGCGTTTC TCGTGACTTT ACTATTACTA TCTCTTTCTT ACATTCCATT GTCTTCTTCC ACTATGCAAC AAGACTTCGT GATGTGTCTA GTCGACAACT CCGACGCTTC GTTTCCAATG GACTCGTCGT TCTTCACTCA CGACCTAAAC GCATCTTCCT TTAAACTGGC GTTAGAGACG TCAGCTCAAA ATCTCCGTTA CTTGATGCCA TCAAATCCTA AGCCAGAGTT CATTTTCGAG CCGCTTTACG AAACGCACGT TCAAGCCGCC GTTCTTTGCG CCAAGAAGTT GAAGCTTCAC TTGCGGCTAA GAAGCGGTGG TCATGACTAC GAAGGCCTCT CTTACGTCTC GGAGATGGAA ACTGCGTTTG TGATCGTCGA CTTGTCGAAA CTTAGACAGA TCAGTGTTGA TATAGAAAGT AACAGCGCGT GGGTTCACGC GGGTGCTTCT ATTGGAGAGG TTTATTACAG GATCCAAGAG AAAAGCAAAA TCCATGGTTT TCCGGCGGGT TTATGCACCA GCCTAGGCAT CGGCGGTCAC ATAATCGGCG GAGCCTATGG CTCAATGATG CGTAAGTTTG GTCTCGGAGC CGATAACGTC CTCGACGCCA GAATCGTTGA CGCTGACGGC AAAATCTTGA ATCGCGCGGC GATGGGAGAA GACGTTTTCT GGGCGATACG AGGCGGAGGC GGAGGAAGCT TCGGCGTTAT TCTTGCCTGG AAAATCAAAC TCGTTCCGGT GCCGGAGGTC GTTACGGTGT TCACTGTCAC GAGGACGCTT GAGCAAGACG GAACTAAGCT TTTGTACAAG TGGCAACAAG TTGCTGATAA GCTTGACGAA GATCTCTTTA TCCGTGTGAT TATTCAGCCG ACGAGCAAAA CTCCGAAGAG CAAAGAAAGA ACTATCTCAA CTTCGTACCA AGGCCAATTT CTCGGCGACG CAAATAGGTT GTTGCAGGTG ATGCAAAGGA GTTTCCCACA GCTTGGACTA ACGAAGAAAG ATTGTTTAGA GACAAGCTGG ATCAAATCGG TAATGTACAT TGCGGGTTTT CCAAGCACTG CGCCATCGGA AGCTTTACTC GATGGGAAAT CGTTGTTCAA GAATTACTTC AAAGCCAAGT CAGACTATGT GGAAGAGCCA ATTCCAATAG AAGGATTAGA AGGGTTGTGG GAAAAGCTTC TAGAAGAGGA CTCACCATTG ACTATATGGA ATCCTTATGG AGGAATGATG GCGAAAATTC CCGAGACAGA GACACCTTTC CCACATAGGA GTGGGACATT GTTCAAGATC CAATGGTTGA CTTTATGGCA AGATGGGAAA GTGAGCGAGG CGAAGCATAT GGATTGGATG AGGGAAATGT ATAGTTACAT GGAGCAGTAT GTGTCGAAAA GCCCGAGATC CGCGTATGTG AACTATAGAG ATCTTGATTT GGGGAGGAAT GGTAAAGGGA GTGATGCAAG AGAATGGGGG AATAAATATT TCAAGGGTAA TTTTGAAAGG TTGGTGCAGA TTAAAGCTAC GTTTGATCCT GAGAATTTTT TTAGCCATGA ACAAAGTATT CCTACGGAAC TTGAGTGAAT TTGGAGGTAG ACAATAATAA GAGTGTGTTT AAGATTTGTC TTAGAAAAGA CTTGTTACTT GTGTTTTTGT GTCTTTTTGT TTTTAAACAT GATCAACACA CTTGTATTTC AATATTGTTA TCCAATCTAA TCCCTTATGA GTTCTTAAAA TTAAGTAATG GCAAATTTGG CTAAACCAAA TCAAATCAAA TTCGCCTA 
Length1808
Protein Sequence
Protein Residue
Map Locationscaffold_1: 13160080.. 13162726
Download Sequence
A.thaliana
AGI-codeAT1G30760.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
20.4939 Ahg322456 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
22.2261 Ahg484008 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
30.05 Ahg480719 Peroxidase superfamily protein
35.5387 Ahg934840 laccase 5
42.1663 Ahg915751 Uncharacterised protein family (UPF0497)
45.1331 Ahg478480 glycerol-3-phosphate acyltransferase 5
48.2494 Ahg903696 Pectin lyase-like superfamily protein
52.8394 Ahg481932 laccase 3
63.5767 Ahg481221 GDSL-like Lipase/Acylhydrolase superfamily protein
64.4593 Ahg493746 SGNH hydrolase-type esterase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression