| Annotation |
|---|
| Description | jgi|Araly1|473812|fgenesh2_kg.1__3766__AT1G44446.1 |
| Sequence |
AAAAGATAAA ATCTCAAACT TTCTTCTAAA ATCCGTTTTC TATTTTTCTT CTCTCTTTTT TCCGGTGACG CCATGAACGC CGCCGTGTTT AGTGCTTCTG CTTTATCTCT TCCTATCTCC TTCTCTAAAA CAAGATCATC TTATCTCTCC AGAAAGAAGG GAGTGAAAGG AGAATTCAGG GTATTTGCTG TATTTGGTGA TGAGAGTGGT TTACTTGAGA AGAAGAGTCA ATGGAGACCT TTGTTTGATG TGGAGGATCC TAGATCAAAA GCTCCTCCAT ATAAAGGAAA GTTTTTAGAT GTTAATCAAG CTATTGAAGT TGCTAGATTT GATATTCAAT ACTTGGATTG GCGTGCTCGT CAAGATCTTC TTACCATCAT GATTCTTCAT GACAAGGTTG TTGATGTACT TAATCCTCTA GCTCGTGAGT ACAAGTCGAT CGGCACTGTG AAGAAAGAAC TAGCTGGATT GCAGGAAGAA TTGTCGAAAG CACACCAACA GGTTCATATA TCTGAAGCAC GGGTTTCAAC TGCTTTAGAC AAGTTAGCTC ACATGGAAGA ATTGGTTAAT GATAGGTTGT TACCTGGCAG AGTTGTAACG GAATTAGATA AACCCTCCAC TTCAGCCACT GCTTCTGCTG TCGAGTTAGA TAGGGAAAAG ACAAACACGG GTGCGAAAAG CTTGAATGTT TCTGGTCCGG TTCCGCCTTA TAGTCCACAA TTGAAGAACT TTTGGTATCC CGTTGCTTTC ACTGCAGATC TCAAGCATGA CACAATGGTA CCAATTGAAT GCTTTGAACA ACCATGGGTT ATATTTAGGG GTGAAGACGG GAAACCAGGA TGTGTACGGA ATACATGTGC GCATAGAGCC TGTCCTCTTG ATCTTGGCAC CGTGAACGAG GGTCGTATTC AATGTCCTTA CCACGGATGG GAATACTCAA CCGATGGAGA ATGTAAGAAG ATGCCCTCTA CAAAGCTACT AAAGGTGAAG ATAAAGTCGT TGCCTTGTCT TGAACAAGAA GGCATGATCT GGATCTGGCC TGGCGATGAG CCACCTGCAC CTACACTACC ATGTTTACAG CCTCCATCAG GGTTTTTAAT CCATGCCGAG CTTGTTATGG ATCTCCCGGT GGAACACGGT TTACTTCTAG ATAATCTCTT GGATCTTGCT CATGCCCCAT TTACTCATAC ATCCACTTTT GCAAAAGGCT GGAGTGTCCC AAGCTTGGTG AAGTTCTTAA CACCATCCTC AAGTCTCCAA GGATACTGGG ATCCGTATCC AATCGATATG GAATTTAAAC CTCCTTGTAT TGTTTTATCG ACAATCGGGA TCTCCAAACC CGGGAAACTA GAAGGAAAAA GCACAAAGCA GTGTGCAACA CATCTTCATC AACTCCATGT CTGTTTACCT TCTTCCAAAA ACAAGACAAG ACTTCTATAC CGAATGTCAC TAGACTTCGC TCCTATATTG AAGAATCTTC CATTCATGGA ACATCTCTGG AGACATTTCG CTGAACAGGT CTTAAACGAA GATTTGCGAC TAGTTATAGG ACAGCAAGAA CGGATGCTGA ATGGTGCAAA CATATGGAAT TTACCAGTTG CTTATGACAA GCTCGGAGTC CGGTATAGAC TATGGAGAAA CGCGGTAGAT CGTGGCGATG ATAAACTACC CTTCTCCGGC TAACTGTTAT TGAAGAAATC TAATGGAAGT TTTTGCAGCT CCCCTTATTC ACCAGCAACC TCAGAAAAGT GTAGGTTATT ATCTGGTTCA TTCTCACCGC AGAAGAGCTT TGCCGAGTAA CAATCTGGAG TTTGTGGATT CATCTAGAAA ACGATGAAAC AAAGAACTTT TGCGTAGATA AAAGACAACA TCCACTGTAA ATCAAAAGGA GATATATTGT TATTCATTTT TCCCTGTGTA CAGTTCACTT TCTATGAGAA ATTGAATATC AGTTTTCCCC ACTAAATTGA TGTCTTCTAA GAACC |
| Length | 1985 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 21672172.. 21675157 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G44446.1 |
| Description | Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain |
| TAIR curator summary | Encodes chlorophyllide a oxygenase which converts chlorophyllide a to chlorophyllide b by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide a . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll b and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22. |
| Alias | [ATCAO][CAO][CH1][ARABIDOPSIS THALIANA CHLOROPHYLL A OXYGENASE][CHLOROPHYLL A OXYGENASE][CHLORINA 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.83095 |
Ahg475445 | Glutamyl-tRNA reductase family protein |
| 10.0995 |
Ahg476523 | B-box type zinc finger protein with CCT domain |
| 13 |
Ahg479172 | high chlorophyll fluorescent 107 |
| 14.5602 |
Ahg478197 | light harvesting complex photosystem II |
| 18.1659 |
Ahg490840 | squalene epoxidase 3 |
| 18.4662 |
Ahg479227 | CBL-interacting protein kinase 1 |
| 20.1494 |
Ahg935667 | circadian clock associated 1 |
| 23.1517 |
Ahg486407 | enzyme binding;tetrapyrrole binding |
| 24.2487 |
Ahg930129 | Major facilitator superfamily protein |
| 24.8596 |
Ahg940828 | magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|