Detail



ID : Ahg474095

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474095|fgenesh2_kg.1__4049__AT1G49600.1
Sequence
ATGCAGACAC CAAACAACAA CGGTTCAACA GATTCAGTGT TACCACCAAC ATCAGCCGGA ACAACACCAC CACCACCGTT GCAGCAATCA ACACCACCAC CTCAGCAACA GCAACAACAA CAACAACAGT GGCAACAACA ACAACAATGG ATGGCTGCTA TGCAGCAATA CCCTGCAGCT GCTATGGCTA TGATGCAACA ACAACAGATG ATGATGTATC CTCACCATCA ATACGCTCCT TACAATCAAG CTGCTTATCA ACAGCATCCT CAGTTTCAAT ACGCTGCTGC TTATCAACAG CAACAACAGC ATCACCAGAG TCAGCAGCAG AAACAGCAGC CACGTGGTGG ATCTGGTGGT GATGATGTGA AGACTCTTTG GGTTGGTGAT CTTCTTCATT GGATGGATGA GACTTATCTC CATACCTGTT TTTCTCACAC CAATGAGGTT TCTTCTGTGA AAGTTATACG CAACAAGCAA ACTTGTCAAT CTGAAGGATA TGGGTTTGTT GAGTTTCTTT CACGTTCAGC AGCTGAGGAA GCTCTTCAGA GCTTTAGCGG TGTAACAATG CCGAACGCGG AACAGCCTTT CCGTTTAAAC TGGGCATCTT TCAGTACTGG TGAGAAAAGA GCATCAGAGA ATGGTCCTGA CCTATCAATA TTTGTTGGAG ATTTGGCTCC AGATGTGAGT GATGCTGTCT TGCTTGAGAC TTTTGCTGGT AGATATCCAT CTGTCAAAGG TGCGAAAGTT GTGATCGATT CCAACACCGG GCGTTCCAAA GGTTACGGGT TTGTCAGGTT TGGTGATGAG AATGAACGAT CAAGGGCTAT GACAGAAATG AATGGTGCTT TCTGTTCAAG CAGGCAAATG CGTGTTGGTA TCGCAACCCC GAAAAGAGCT GCTGCTTACG GCCAACAAAA TGGTTCACAA GCTCTCACAC TGGCTGGTGG ACATGGAGGA AATGGTTCAC TGTCTGATGG AGAATCAAAT AACTCAACAA TATTTGTTGG TGGCCTTGAT GCTGATGTTA CTGAGGAAGA CCTCATGCAA CCTTTTTCCC AGTTTGGGGA AGTTGTTTCA GTGAAGATCC CAGTAGGAAA AGGATGTGGC TTTGTCCAAT TTGCTAACAG GCAGAGTGCT GAAGAAGCCA TTGGGAACTT GAACGGGACA GTCATCGGGA AAAACACTGT CCGCCTTTCG TGGGGAAGAA GCCCCAACAA ACAGTGGAGA AGTGACACTG GCAACCAATG GAATGGAGGA TATTCAAGAG GTCAAGGTTA CAACAATGGA TATGCTAATC AGGACTCAAA CATGTACGCT ACTGCAGCGG CTGCTGTCCC AGGAGCTTCT TGAAAGTGTT GGTATGTCTC TATCATCAGA AACCCCGTGA GTCCTGGACT TACGGGTATT GGGATAAAAA CAAACCATTG GGTGATCAAA GTGATCCATC CAATGATAGT TGTTGGTTCA GAGGTTAGCT CGCACCATCG AAACTAAAAC CTCTAGTGTC CAAAGAGGGT TTTGTATCCT GGATTTGAAT CTTGCTTATC TTGCTGTCTC AGTCTCTGTC AAAATTTTGG GGTTGTCTGA TACTTGAATG TTTATTTTCA GTTTTTTTTT TTGTTACTGA GACTTCCTCA AAGTCAGAGG GTCCACAATA AGTAATTT 
Length1668
Protein Sequence
Protein Residue
Map Locationscaffold_1: 24584331.. 24587505
Download Sequence
A.thaliana
AGI-codeAT1G49600.1
DescriptionRNA-binding protein 47A
TAIR curator summary
Alias[ATRBP47A][RBP47A][RNA-binding protein 47A]
Gene coexpression
MR
MR Locus Description
11.3137 Ahg944513 Class I glutamine amidotransferase-like superfamily protein
11.9164 Ahg911478 Ribosomal protein L20
13.9642 Ahg496650 DNA polymerase V family
16.0935 Ahg486730 ubiquitin 5
16.2481 Ahg472541 COP9 signalosome 5A
16.3095 Ahg483709 eukaryotic initiation factor 3 gamma subunit family protein
19.0788 Ahg483491 molybdopterin biosynthesis MoaE family protein
20.7846 Ahg483634 Translation elongation factor EFG/EF2 protein
22.6274 Ahg470656 GSK3/SHAGGY-like protein kinase 1
23.2379 Ahg492297 FK506 BINDING PROTEIN 53
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression