Detail



ID : Ahg474167

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474167|fgenesh2_kg.1__4121__AT1G50410.1
Sequence
ATTTTTTTCT CCGATCAAAA CGCCGCCGTA GCGTCTCTGA TTCTTTCTTT GGGTCAACTT ATGAAGAACA ACAATTGGCT TCACACTCTC TCTTTTCTCA ATTTTGCTTC TTTCTTCTTT CCTGGTACGG CTGATTAGAA ACTTGACCGC TTAATTCTTC AAAGGAGTTC TTGCCATGGA TTCCGCTATT GATATCAGTT CAGATAGTGA TGTCGAGATA CAAGAAACTA GAACCAGGCC TCAACTTCCC CCACGGACAG CTGAAGGGTC TCATAGGAGG GATCCCTCTA CGCTAAGACC GCAATTTTTT AGTGGGAGGT CTTCCGGTGC AAATGGCCAC ACGAAAACAG GACTTACAAA TCCCGCTTCA CGTAATGGTT TTGAAACCAA GCCACTGCCA CGGGCAGAAC ACCGTGCACA TTTTGCGGGA AATGGGACTA TAGGAACTTC CAGAATTCCC AATATCTCTG TTGGAGATTA TGAGAAATTT TCATCTCAAC AAGCTCTTAA AAGGACACAT TCAACAGCTT TTAGTCGAAC TCCTTTTCCT CCCAGACCTG ATATTGGCAC AAGTAATGGG AATGCGAGTC ACTTTCGAGG TGGAGCACAT GATGAGATAG GCATGGGGCG TATGACTAAT GGCACTCGGA TCCTACCTCC ATCTGTGGCG CATGGAACAT CTGCGTCTCC TTCACATTTT AATGGTTTAA GTGATCCAAT GCATAGGAAT GGCATAACCG AAGAAAGGAA TTCAGAAAAT GATGAGAGGC TGATCTATCA GGCTGCACTA CAGGAACTGA ATCAGCCCAA GTCTGAGGTC GATTTACCTG CCGGTCTTCT TTCTGTTCCC CTTATGAAGC ATCAGAAAAT TGCATTGGCC TGGATGTTTC AGAAGGAAAC TAATAGTTTG CACTGTATGG GAGGGATATT AGCTGATGAT CAGGGCCTTG GTAAGACAGT CTCGACTATT GCTCTTATCC TAAAGCAAAT GCACGAGGCA AAATTAAAGT CCAAGAATTC AGGCAATCAA GTGGCTGAAG CATTGGATCT GGATGCTGAT GATGAGTCAG AAAATGCATT TGAGAAACCA GAGTCTAAGG TTTCAAATGG TAGTGGTGTG AATGGTAGTT CAGGCATAAA GAAAGCCAAG GGAGAAGAAG CGAGTACTTC AACACGCAAA TTCAACAGGA AGCGACCAGC TGCTGGCACT TTAATTGTTT GTCCAGCAAG TGTTGTGCGG CAGTGGGCAA GAGAACTTGA TGAGAAAGTT ACTGATGAAG CCAAACTTTC TGTTTTAATA TACCACGGTG GTAACAGAAC CAAAGATCCT ATTGAACTAG CAAAATATGA TGTGGTTATG ACAACTTACG CTATTGTTTC AAATGAAGTT CCAAAGCAAC CCCTGGTGGA TGACGATGAG AATGATGAAA AAAATTCTGA AAAATACGGT CTCGCTTCTG GCTTCTCCAT CAATAAGAAA CGGAAAAATG TAGTGGGTAC TACTAAGAAA AGTAAGAAAA AAGGTAAGAA TAATGCTGAC GATTCTTCGT CTGACCCTGA CTCTGGTACT CTAGCAAAAG TTGGGTGGTT CAGAGTTGTA CTAGATGAAG CTCAAACAAT TAAGAATCAT AGAACCCAGG TGGCAAGAGC ATGTTGCGGT CTTCGAGCCA AAAGGAGATG GTGTTTGTCT GGAACACCGA TACAAAATAC AATAGATGAT TTATACAGCT ATTTCAGGTT TCTAAAATAT GATCCATACG CTGTGTACAA GTCATTCTGC CACCAAATTA AGGGTCCAAT TTCCAGAAAT TCCCTTCATG GTTACAAGAA GCTTCAAGCT GTTCTAAGGG CTATAATGCT GCGCCGTACG AAAGGAACAT TGCTTGATGG CCAGCCTATA ATTAATCTAC CACCAAAGAC AATTAATTTG AGCAACGTGG ACTTTTCGGT AGAGGAGCGG TCTTTCTACA TGAAGCTTGA ATCTGATTCA CGTTCTCAGT TCAAGGCATA TGCTGCTGCA GGAACTTTGA ATCAAAACTA TGCAAACATT CTTCTCATGC TCTTGCGACT ACGCCAAGCT TGTGACCACC CCCAACTTGT TAAAAGATAT AACTCAGATT CTGTTGGAAA AGTATCAGAA GAAGCTGTTA AAAGGCTCCC TAAAGAGGCT CGATTTAGCC TGCTCAGTCG CTTAGAATCG TCTCCCATCT GTTGTGTCTG CCATGATCCA CCAGAAGACT CTGTTGTTAC ATTGTGTGGC CATATATTCT GCTATCAGTG TGTATCAGAT TATATCACAG GAGATGAGGA CACGTGCCCT GCGCCTAGAT GCAGAGAACA GCTTGCGCAT GATGTTGTTT TCTCTAAATC TACCCTTAGA AGTTGCATTG CTGATGATTT GGGTTGTAGT TCCTCACAGG ATAAAGGGCA TGACAAAGCA GTTTTTCAGA ACGGCGAGTT TAGTTCATCA AAGATCAAAG CTGTCTTAGA TATTCTGCAG TCACTTTCTA ACCAAGGCAG TCCAAACTCA ACACAGAATG GTCAAATGGC TTCTTCCTCG CAGCAGCCGT ATGATGATGA TGATGATGAT GATGATGTCA CCATTGTCGA GAAACCGAGT CTGCAGTCAA CTCCTTCTAA CCGAGGACCA ATAAAAACGA TTATATTTTC CCAGTGGACT GGTATGCTTG ACTTGGTCGA GCTATCTCTA AATGAAAATA GTATAGAATT CAGAAGATTA GATGGTACAA TGAGTCTAAT TGCCAGAGAC AGAGCTGTGA AAGAATTCAG CAACGATCCA GAGGTAAAAG TGATGATAAT GTCTTTAAAA GCTGGAAATC TTGGGCTGAA TATGATTGCT GCATGTCATG TCATTCTTCT TGATCTTTGG TGGAATCCAA CTACTGAAGA TCAGGCTATT GATCGAGCAC ATCGTATTGG ACAAACTCGA CCAGTTACTG TAACTCGTAT TACGATAAAA AATACTGTGG AGGATAGAAT TTTGGCTCTC CAGGAAGAGA AAAGAAAAAT GGTTGCGTCT GCCTTTGGTG AAGATCATGG TGGAAGCTCT GCAACTCGAT TAACAGTTGA TGATCTCAAA TATCTATTCA TGGTGTAGCT GTTCTTAAAT CTTCGGTTGG GGAAGTTTCG CTTCTTTCAG AATTTTGATC ATGAGCTGCA TTTTTGTGTT CTTCAGGTTC ACAGATTTGA AATGAGGAAA TATGTAAATA ACTTATCTGT TG 
Length3242
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25103531.. 25108970
Download Sequence
A.thaliana
AGI-codeAT1G50410.1
DescriptionSNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.8743 Ahg473066 syntaxin of plants 61
13.2665 Ahg477351 glucuronokinase G
16.1864 Ahg333489 RING/U-box superfamily protein
20.9762 Ahg937238 Transducin/WD40 repeat-like superfamily protein
21.6333 Ahg943759 Nucleotidyltransferase family protein
23.6643 Ahg475014 Aldolase-type TIM barrel family protein
26.8328 Ahg484483 ENTH/VHS family protein
34.2929 Ahg480373
39.2556 Ahg491970 AFG1-like ATPase family protein
41.7852 Ahg482041
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression