Detail



ID : Ahg474797

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474797|fgenesh2_kg.1__4751__AT1G56345.1
Sequence
ATACAAATGT CACTGCTTCG AAACCTCTTC TCCTTCTCCA TCTCTACAAA TTCAATTCTC ACAAAACCCT ATTTCGCAAT CTCAACCAAA GCCATGGAAT CTACCTCTGA ACTCAATCTC CATTACCCAA AACCCATATC TCCCCCTCCA CCTCCAATCT CCAAAGACAT TGAACTCAGA AGAGCAATGG AAGCTTCATC GAAATCAAGT CTCTTCAATC TCACAAGAGA CCATGTATTA TACGAAGACG AATACCTAAT GGCTGTGAAT AAACCAAAAG GTGTTTATTG TGAAGCTGTT CTTCGCTCTG CTCCTCAAAT TGTTCTTGAT TCTTCGAGTG AGTTTCATTT AGCGAATAGG TTAGATCGTG ATACTAGTGG TGTGATGATT ATTACTAAGT CACATAAAGT CGCTGCTAAG CTTGTTAAGG CTTTCACAGA ACATAAGATT CGTAAATCAT ACATTGCTCT TTGTATTGGT TCATCTCCAA ATTGGAGGAA GATTACGGTT AGTTCAGGTC ATGGACGGTC GAAACACGGT GCTTGGCGTG TTTACGCTGC GTTGGATGTT GGTAGAGTTT TACCTGGTGG ATCTTTTGTT AGAGATATGG AGACGACGTT CGAAGTTGTA TCGGTAAACG GTGTGGAAAC CGAATCTTGT GAAGTGGAAA ATGTGATTGT TGTTGAAGGG GAGCAAGAAT TGAGTTGTGG TGGAGATGAT GTTGTTGTGG TTAGGGCGTT TCCGCGAAGT GGGAGGACGC ATCAGATTAG GTTACATTGT CAGTATCTTG GGATTTCGAT TAGAGGAGAT GTTAAGTATC ATGGAATGTA TGAGTGGAGA GGAAGAACAT TTGAGGGGCA TGAGCTTCAT GCTGAGTGTT TGTCGTTGGA TCATCCGGTT ACGGATGATC CTATTGTTAT TCGAGCTCCT CTTCCGTGCT GGGCCACCAG AGATGAAAGT TGTAACGGTT GATGGTTAGT TATCAATGGA TAGTGTTAAG ATCTTGACAT TGGTTGATTT GTGTTTTTTT TAAAAATTCA TTTCTTCAAT GTCAAAGATG GAAGATTAAC ATTAGAAAGA AGGAAGTACA TTGAATACAA TCCTATGTTT CCTTTTGTTT CTTTTTATAA ACTCGATAGC ACAACATGTG TTTCTCATAC GAAATCTGCA GCAACAACTT GTATTAGCCT TCTATGATTT TTCTTTTGTT T 
Length1211
Protein Sequence
Protein Residue
Map Locationscaffold_1: 30514578.. 30515666
Download Sequence
A.thaliana
AGI-codeAT1G56345.1
DescriptionPseudouridine synthase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg477603 Tetratricopeptide repeat (TPR)-like superfamily protein
24.0832 Ahg491161 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
42.9884 Ahg471752 Tetratricopeptide repeat (TPR)-like superfamily protein
48 Ahg487478 spindle pole body component 98
60.7947 Ahg947470 Protein with RING/U-box and TRAF-like domains
70.7814 Ahg490389 methyltransferases
80.9444 Ahg493491 Pentatricopeptide repeat (PPR) superfamily protein
94.3822 Ahg480544 GLN phosphoribosyl pyrophosphate amidotransferase 1
97.2882 Ahg487191 DNA GYRASE B2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression