Detail



ID : Ahg475300

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475300|fgenesh2_kg.2__430__AT1G60190.1
Sequence
ATGATCCATA CACAAACCGG CTCGAATCGT CGGATTCTGA CCTTTCCGGC GGTGAATCCA TGCGAATCGA TCGCCATAAC CACTCTCGTC GACTCACTAT TACAACTCGC CGGCGAGATT CTTACCTTCA AACCAAAAGA CTTCTCTACC AACAAAAGAA GTGTTAAAGA AACTCTTCGA CATATCCAAT CTCTTGTGAT CTTCTTCGAG GAGCTCCGGA TTCAAATCCG GGTCGGGTCA ATCTCAGCGG GTCGTTCAGC AATCTTGAGC CTATCAGAGC TCCATGTCAT CTTCCAGAAA CTCAAGTTCC TTCTAGAAGA CTGTACAAGA GAAGGAGCTA AGCTATATAT GTTGATGAAC TCCGGTCAAG TCTCAGCTCA TTTCCGGGCT TTGACCCGAT CCATATCCAC TAGCCTAGAC ACGTTTCCAG TCGGCTCTGT TGACTTACCT AGAGAAGTCA ACGAGTTAAT CTATCTAGTA ATGCGTCAGA CTCGAAAATC CGAAGCAAGA CCTGACCGAG ACGACAAGCG GGCTATAGAC TCTGTTTATT GGTTCTTTAA TCTGTTCGAG AACAGAATTA ACCCGAACTC GGATGAAATA CTCCGAGTTC TTGATCACAT TGGTGTAAGA AAATGGAGAG ATTGCGTCAA CGAGATTGAT TTTATACGAG AAGAGATCTC CACCGGGAAG AAGAGTAACA TCGAAATCGA GCTTCTCAGC AACTTAATGG GATTCATATG TTACTGTAGA TGTGTGATAC TTCGAGGCAT TGATGTAGAT GATGAAGAGA AAGACAAAGA AGAAGACGAC ATGATGATGA TTCGAAGTTT AAACGTTGAT GATCTTCGTT GTCCGATTTC TCTAGAGATC ATGAGTGATC CAGTGGTTTT AGAAACAGGA CACACGTATG ATCGGAGCTC TATCACAAAG TGGTTCGCTT CCGGTAACAT CACGTGCCCT AAGACCGGTA AAACTCTGGT AAGTACTATG TTGGTGGATA ACTTCTCTGT CAAGCAAGTG ATTCAAAGCT ACTGCAAGCA AAACTGTGTA GTTTTGGGTC AAAAGGGGAA GAAGAAGACG ATTGTGGCGG AGAGTTTAGC GGCGGAAGAA GCCGGAAAAC TAACCGCGGA GTTTCTCGCC GGGGAATTGA TCAACGGAGG TGAAGAAGAG ATGGTTAAAG CATTAGTGGA GATTCGAATT CTCACCAAAA CGAGTAGTTT TTTCAGATCT TGTTTGGTGG AAGCTGGTGT TGTTGAATCG TTGATGAAGA TTCTGCGATC GGAAGATCAG AGGGTTCAAG AAACCGCCAT GGCTGGGATT ATGAATTTAT CGAAAGATAT CACCGGGAAA ACTCGAATCG CCGGAGAAGA CGGTGGTGGA TTAAGGCTAA TCGTTGATGT TTTAAACGAA GGAGCTAGAA GAGAGAGTAG ACAATATGCA GCAGCTGCTC TGTTTTATCT CTCTTCCGTC GGAGATTATA GTAGATTGAT CGGAGAAATC TCCGATTCGA TTCCGGGATT GGTGAGAATC GTTAAAAGTT GCGATTACGG TGATTCAGCG AAACGCAACG CGTTGATCGC GATTCGGAGT TTGTTAATTA ACCAACCTGA TAATCACTGG CGTGTCCTGG CCGCCGGAGT TGTTCCCGTT CTTCTCGATT TAGTGAAATC GGAGGAGATC AGCGACGGAG TTACGGCTGA TTCGATGGCG ATTTTAGCGA AAATGGCGGA GTATCCAGAC GGGATGATTT CAGTGCTCCG TCGTGGAGGA TTAAAGCTTG CGGTGAAGAT TTTGGGTTCG TCGGAGGTTT CGTCGGCGAC GAAGCAGCAC TGTGTTGCTC TGCTTTTGAA TCTGTGTCAT AACGGCGGAA GTGACGTCGT TGGGTCTCTC GCTAAGAATC CGTCTATTAT GGGGTCGCTT TACACGGCGT CAAGTAACGG AGAGTTTGGA GGTGGGAAAA AGGCAAGTGC GCTTATCAAA TTGATCCACG AATTTCAGGA GAGGAAAACC GGTCCGGTTG AACCGGTTAT AGAAAGAGAA CGGTTTATCC ACGCCTGGTG ATTGATACAC ACGCTACACA GTAACTCTTT GAGCTTTTTT TAATATAACT TCATTTTTTA TAGGTTAAGG ATGTAATACT AATTTTACTT ATATACTTGT ATATTTTAGT TCTGGGATTT TTTAATAACC CAAAGAGCTA 
Length2200
Protein Sequence
Protein Residue
Map Locationscaffold_2: 3029429.. 3031646
Download Sequence
A.thaliana
AGI-codeAT1G60190.1
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias[AtPUB19][PUB19][plant U-box 19]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg478868 nine-cis-epoxycarotenoid dioxygenase 3
2.82843 Ahg474819 galactinol synthase 2
3.60555 Ahg479964 heat shock transcription factor C1
3.87298 Ahg921726 RING/U-box superfamily protein
4.79583 Ahg479829
4.89898 Ahg481911 Protein phosphatase 2C family protein
5.65685 Ahg950731 C2H2-type zinc finger family protein
5.65685 Ahg486731 Protein phosphatase 2C family protein
6.55744 Ahg496423 myb domain protein 96
6.9282 Ahg325294 Late Embryogenesis Abundant 4-5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression