Detail



ID : Ahg475311

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475311|fgenesh2_kg.2__441__AT1G59990.1
Sequence
AGTGAGCTAA TGAAGAGACT GAAAACAGAG GTTTCTTATT TTGCTTAAAC CCTAAAACCT CATTTGGATT AGGTTTTCTC CAATCTTATC CGCCGTGATA AAATCTGATT GCTTTTTTCT TTTTCTTTAT GAAACTTTGA TTTGTGGAAT CCGATGATTC TCTCACGCTC TGTCTCTGTG CTTCATTTGT GTGGAGTCTC ATCTTCAGCG CCGTCGAAGC TCTTATCCCA GAGGTTCAAG GTCTCGTTCG CTCTCGCTTA TGGTTCATCT GTTTCTTTCC GTTTAAGCTC TCTCAATCGA TCTGACGCGA AATGGGTTCG TGGGTTTGCG TCTACTACTG AAGCAGAAGT AGAGAAAAAG GGTAATGATA CGTTTTTTGC CGACAATACC GTTTCTTGGA AGTCTCTTGG GTTATCAGAT AACGTCTCTA TAGCTCTTCG AGATTCTGGG TTCGATAGAC CATCTCTCAC TCAGGCTGTT TGCATACCGT CTATATTGTC TGGGAAAGAT GTGATTGTTG CAGCAGAAAC TGGTAGTGGT AAAACACATG GATATCTTGC TCCAATAATT GATCGATTAA CGAACACTGC TATTGATTCC GAGTATACGA ATGGGGAGGA AAGGCCGTTT CCGCTTAAGA ATCTCTCTCT TATCCTGTGT CCAAATGTGA TGCTGTGTGA ACAAGTGGTT AGGATGGTTA ATGGTCTTCT TGGTGAAGAT GGTAATCCAC TTCTTAGAGT TGAAGCTGTT TGTGTTCCAC AGGGTTGGCC AGATAGACTG CCTGATATAA TTGTTTCGAC ACCCGCTGCT CTTCTGAATA ATATTGAGCC GAAAAGAAAT AGGCGCCTGG AATTTCTTCG ATGTGTCAAA TATGTGGTCT TTGATGAAGC TGATATGCTT CTTTGCGGAA GCTTCCAGAA TCAGATTATA CGTCTGATAA ATATGCTGCG TTTCGATGAG AAGCAAGTGT CTCGTTTGGC TACATCCACA ATTGGCAAAC CAATGGAGAT TGATGCCTCT GTACCCCAAA TTGATCTAGA AAATGAGGAT GATGCTGAAT TCGATGATGG ATCTATTTCT GAGGAAGAGG AAGAGGAAGA GGAATATCTT GATGATACAG CACATATGCC TAGTGTTGAA GCTGAAGCTC GGTCAGACAC CAAAAAGGGC TGGAGGAGAG TGAGAAAGAT CTACAGCCGT AGCAAGCAGT ATATCTTCAT TGCAGCCACA CTTCCAGTTA ATGGGAAGAA GACTGCCGGA GGAATTTTGA AACATATGTT TCAAGATGCT ATTTGGGTTA GTGGAAACTT TCTTCACCGA AACAGTCCGA GACTAAAGCA TAAATGGGTT GAAGTCACAG TTGACTCACA AGTTGATGCT CTTATAGAGG CTGTAAAAAA CAATAACAAC ACCAACACAG AGAGGACGAT GGTGTTTGCA AACACGGTTG AAGCTGTTGA AGCAGTGGCC GATATATTGG AGAAAGCTAG TATTCAGTGT TATCGTTATC ACAAGAACCA CAAGCTAGAC GAACGTGCTA ATATATTAGC TGATTTCAGA GAAACCGGCG GTGTCTTTGT TTGCACCGAT GCCGCTGCCC GAGGAGTTGA TGTTCCTAAT GTCTCTCACG TTATTCAGGC GGATTTTGCT AGTTCTGCAG TGGATTTCCT TCACAGGATA GGCCGAACAG CTAGAGCTGG GCAATATGGA ACTGTGACCA GTCTATACAC CGAGGCTAAT CGTGATTTAG TAGAAGCAAT ACGTGAAGCA GTGAAGATGG GTCAGCCAGT GGAAACTGCA TTCAGCAGGA AGAGAGGTTT TAGGAACAAG GTTAAGAAGA GAGCTTTTTT GAAAGCTGGA GAAGCAGAGG AGCCTCAAGC TGTGAGATTT TAAGTTCTGT TGTTTTCTTT TTACAATTTC ATAGGCGTTG TTTGTATATA GAAGTACGCA AAATCGAATA ATCACTATTT GTTATTTTCT TGTACCAATT TTTTT 
Length1995
Protein Sequence
Protein Residue
Map Locationscaffold_2: 3146440.. 3149424
Download Sequence
A.thaliana
AGI-codeAT1G59990.1
DescriptionDEA(D/H)-box RNA helicase family protein
TAIR curator summary
Alias[EMB3108][HS3][RH22][EMBRYO DEFECTIVE 3108][HEAVY SEED 3][RNA helicase 22]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg494908
3.4641 Ahg930087 RNA methyltransferase family protein
5.83095 Ahg491303 tRNA synthetase class II (D, K and N) family protein
6.32456 Ahg478911
6.40312 Ahg929946 Ribosomal L18p/L5e family protein
7.07107 Ahg478403 DNA GYRASE A
8.30662 Ahg474658 Tetratricopeptide repeat (TPR)-like superfamily protein
8.83176 Ahg470361 prohibitin 2
8.88819 Ahg492065 Met-10+ like family protein
9.16515 Ahg903674 3'-5'-exoribonuclease family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression