Detail



ID : Ahg475566

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475566|fgenesh2_kg.2__696__ATCG00430.1
Sequence
ATGAATTCCA TTAAGTTTCC CGTACTTGAT CGAACAACAA AAAATTCCGT TATTTCAACT ACGTTAAATG ATCTTTCAAA TTGGTCAAGA CTTTCCAGCC TATGGCCGCT TCTTTATGGT ACCAGTTGTT GTTTCATTGA ATTTGCCTCA TTAATAGGCT CCCGATTTGA CTTTGATCGT TATGGGTTAG TACCAAGATC GAGTCCTAGA CAGGCGGACC TTATTTTAAC AGCAGGTACA GTAACAATGA AAATGGCTCC TTCTTTAGTG CGATTATATG AACAAATGCC TGAACCAAAG TATGTTATTG CTATGGGAGC GTGTACAATT ACGGGGGGGA TGTTCAGTAC CGATTCTTAT AGTACTGTTC GAGGAGTTGA TAAGCTAATT CCTGTAGATG TCTATTTGCC GGGTTGTCCA CCTAAACCAG AGGCTGTTAT AGACGCTATA ACAAAGCTTC GTAAGAAAAT AGCTAGAGAA ATCTATAAGG ATCGAATTAG ACCTCAACAG GGTAATCGGT GTTTTACTAC CAATCACAAG TTTTTTGTTG TACGCAGTCC GCATATTGGA AATTATGATC AAGAATTACT CTATCCACCA TCATCTACTT CAGAGATCTC TACTGAAAAA TTTTTTAAAT ACAAAAGTCC AGTATCGTCC CACGAATTAG TGAATTAG 
Length678
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8211927.. 8212604
Download Sequence
A.thaliana
AGI-codeATCG00430.1
Descriptionphotosystem II reaction center protein G
TAIR curator summaryEncodes a protein which was originally thought to be part of photosystem II but its wheat homolog was later shown to encode for subunit K of NADH dehydrogenase.
Alias[PSBG][photosystem II reaction center protein G]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg925541 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein
2.82843 Ahg925507 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein
4.47214 Ahg925539 NADH dehydrogenase subunit J
6.9282 Ahg475583 ATPase, F0 complex, subunit B/B', bacterial/chloroplast
6.9282 Ahg952677 ribosomal protein L32
8.77496 Ahg907877 NADH dehydrogenase subunit J
11.1803 Ahg925483 photosystem II reaction center protein M
13.4907 Ahg925471 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein
16.0624 Ahg475584 ATP synthase subunit alpha
20.4939 Ahg475560 photosynthetic electron transfer A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression