| Annotation |
|---|
| Description | jgi|Araly1|475624|fgenesh2_kg.2__754__ATCG00860.1 |
| Sequence |
ATGAAAGGAC ATCAATTAAA ATCCTGGATT TTCGAATTGA GAGAAATAGT GAGAGAGATC AAGAATTCTC ACTATTTCTT AGATTCATGG ACCCAATTCA ATTCAGTGGG ATCTTTCATT CATATTTTTT TCCACCAAGA ACGTTTTAGA AAACTCTTGG ACCCTCGAAT TTTTAGTATC CTACTTTTGC GCAATTCACA GGGTTCAACA AGCAATCGAT ATTTCACGAT CAAGGGTGTA GTACTATTTG TAGTAGCGGC CCTTCTATAT CGTATTAACA ATCGAAATAT GGTCGAAAGC AAAAATCTCT ATTTGAAAGG GCTTCTTCCT ATACCTATGA ATTCCATTGG ACCCAGAAAT GATACATCGG AAGAATCTTT TGGGTCTTGC AATATCAATA GGTTGATTGT TTCGCTCCTG TATCTTACAA AAGGAAAAAA GATCTCTGAG AGCTGTTTCC GGGATCCGAA AGAGAGTACT TGGGTTCTCC CAATAACTCA AAAGTGTATC ATGCCTGAAT CTAACTGGAG TTCGCGGTGG TGGAGGAACT GGATCGGAAA AAAGAGGGAT TTTTGTTGTA AGATATCTAA TGAAACCGTC GCTGGAATTG ATATCTCATT TAAAGAGAAA GATATCAAAT ATCTGGAGTT TCTTTTTGTA TATTATATGG ATGATCCGAT CCGCAAGGGC CATGATTGGG AATTGTTTGA TCGTCTTTCT CCGAGTAAGA GGCGAAACAT AATCAACTTT AATTCGGGAC AGCTATTCGA AATCTTAGTG AAAGACTGGA TTTGTTATCT CATGTTTGCT TTTCGTGAAA AAATACCAAT TGAAGTGGAG GGTTTCTTCA AACAACAAGG AGCTGGGTCA ACTATTCAAT CAAATGATAT TGAGCATGTT TCCCATCTCT TCTCGAGAAA CAAGTGGGCT ATTTCTTTGC AAAATTGTGC TCAATTTCAT ATGTGGCAAT TCCACCAAGA TCTCTTCGTT AGTTGGGGGA AGAATCCGCA CGAATCGGAT TTTTTTAGGA AATTATCGAG AGAGAATTGG ATTTGGTTAG ACAATGTGTG GTTGGTAAAC AAGGATAGAT TTTTTAGCAA GGTACGAAAC GTATCGTCAA ATATTCAATA TGATTCTACA AGATCTAGAT TCGGAATATC ACTATCACAC ATTGATCAAT CAAAGAGAGA TCAACAACTA AAAGAAAGAT CGATTCTTTT GGATCCTTCC TTTATTCAAA CGGAAGGAAG AGAGATAGAA TCAGACCGAT TCCCTAAATA CCTTTCTGGC TATTCCTCAA TGCCCCGGCT ATTCACGGAA CGTGAGAAGC GAATGAATAA TCATCTGCTT CCGGAAGAAA GCGAAGAATT TCTTGGGAAT CCTACAAGAG CCATTCGTTC TTTTTTCTCT GACAGATGGT CAGAACTTTA TCTGGGTTCG AATCCTACTG AGAGGTCCAC TAGGGATCAG AAATTGTTGA AGAAAGAACA AGATGTTTCT TTTGTCCCTT CCAGGCGATC GGAAAATAAA GAAATAGTTA ATATATTCAA GATAATTACA AGAGAGATTC AAGAAATGGC AGATCTATTC ACTCTATCAA TAACCGAGCC GGATCTGGTG TATCATAAGG GATTTGCCTT TTCTATTGAT TCCTACGGAT TGGATCAAAG ACAATTCTTG AAGGAGAAAT CTTTATTGGT TCTACCTCCT ATTTTTTATG AAGAAAATGA ATCTTTTTAT CGAAGGATCA GAAAAAATTG GGTCCGGATC TCCTGCGGGA ATTATTTGGA AGATCCAAAA AGAGTGGTAT TTGCTAGCAA CAACATAATG GAGGCAGTCA ATCAATATAG ATTGATCCGA AATATGATTC AAATCCAATT CCAATATAGT CCCTATGGGT ACATAAGAAA TGTATTGAAT CGATTCTTTT TAATGAAGAG ACCTGATCGC AACTTCGAAT ATGGAATTCA AAGGGATATA ATAGGAAATG ATACTCTGAA TCATAGAACT ATAATGAAAG ATACGATCAA CCAACATTTA TCGAATTTGA AAAAGAGTCA GAAGAAATGG TTCGATCCTC TTATTTTTCT TTCTCAAACC GAGAGATCCA TAAATCGGGA TCCTAATGCA TATAGATACA AATGGTCCAA TGGGAGCAAG AATTTCCAGG AGCATTTGGA ACATTTCGTT TCTGAGCGGA AGAGCCGTTT TCAAGCAGTG TTCGATCAAT TATGTATTAA TAAATATTTG ATTGATTGGT CTGAGGTTAT TGATAAAAAA GATTTGTCTA AGTCACTTCG TTTCTTTTTG TCTAAGTTAC TTCGTTTCTT TTTGTCCAAG TTACTTCTTT TTTTGTCCAA GTTACTTCTC TTTTTGTCTA ACTCACTTCC TTTTTTCTTT GTGAGTTTCG AGAATATCCC TATTCATAGG TCTGAGATCC ACATCTATGA ATTGAAAGGT CCGAACGATC AACTCTGCAA TCAGTTGTTA GAATCAATAG GTCTTCAAAT CGTTCATTTG AAAAAGTTGA AACCCTTTTT ATTGGATGAT CATAATACTT CTCAAAAATC GAAATTCTTG ATCAATGGAG GAACAATATC ACCATTTTTG TTCAATAAAA TACCAAAGTG GATGATTGAC TCATTCCATA CTAGAAAGAA TCGCAGGAAA TCTTTTGATA ACACGGATTC CTATTTCTCA ATCGTATCCC ACGATCAAGA CAATTGGCTG AATCCCGTGA AACCATTTCA GAGAAGTTCA TTGATATCTT CTTTTTCTAA AGCAAATCGA CTTCGATTCT TGAATAATCC ACATCACTTC TGCTTCTATT GTAACAAAAG ATTCCCTTTT TATGTGGAAA AGGCCCGTCT CAATAATTCT GATTTTACGT ATGGACAATT CCTCACTATC TTGTTCATTC ACAACAAAAT ATTTTCTTCG TGCGGTGGTA AAAAAAAACA TGCTTTTTTG GAGAGAGATA CTATTTCACC TTCGTCAATC GAGTCACAGA GCTATTTACT CGATTGCAGA CATTTCTGGA CACCTCTAAT AGAGGGACAA AGAGTCAATT TTGAAAGAAC GTATTGTCAA ACTCTTTCAG ATATGATCTA TCCGATTCAG AAGAGAAGAG CTTGCATCAG TATCTCAATT TCAATTCAAA CATGGAGGAA AAAACGGAGT CTTTGCCTAA AAAAATGCGT TGACAAAGGG CAGATGGATA GAACCTTTCA ACGAGATAAT AGTGCTTTTT CAACTCTCTC AAAATGGAAT CTATTCCAAA CATATATGCC ATGGTTCTTT ACTTCGACAG GGTACAAATA TCTAAATTTG ATATTTTTAG ATACTTTTTC AGACCTATTG CGGATACTAA GTAGCAGTCA AAAATTTGTA TCCATTTTTC ATGATATTAT GCATGGATTA GATATATCAT GGCGAATTCT TCAGAAAAAA TTGTGTCTTC CACAAAGGAA TCTGATAAGT GAGATTTCGA GTAAGTCTTT ACATAATCTT CTTCTGTCCG AAGAAATGAT TCATCGAAAT AATGAGTCAT CATTGATATC GACACATCTG AGATCGCCAA ATGTTCGTGA GGTCCTCTAT TCAATCCTTT TCCTTCTTCT TGTTGCTGGA TATATCGTTC GTACACATCT TCTCTTTGTT TCCCGAGCCT ATAGTGAGTT ACAGACAGAG TTCGAAAAGA TCAAATCTTT GATGATTCCA TCATACATGA TTGAGTTGCG AAAACTTCTG GATAGGTATC CTACATCTGA ACTGAATTCT TTCTGGTTAA AGAATCTTTT TCTAGTTGCT CTGGAACAAT TAGGAGATTG TCTAGAAGAA ATACGGGGTT CTGGCGGCAA CATGCTATGG GGTGGTGATC CCGCTTATGG GGTCAAATCA ATACGTTCTA AGAAGAAAGA TTTGAAAATA AATTTCATCG ATATCATCGA TCTCATAAGT ATCATACCAA ATCCCATCAA TCGAATCACT TTTTCGAGAA ATACGAGACA TCTAAGTCAT ACAAGTAAAG AGATCTATTC ATTGATAAGA AAAAGAAAAA ACGTGAGCGG TGATTGGATT GATGATAAAA TAGAATCCTG GGTCGCGAAC AGTGATTCGA TTGATGATAA AGAAAGAGAA TTCTTGGTTC AGTTCTCCAC CTTAAGGGCA GAAAAAAGGA TTGATCAAAT TCTATTGAGT CTGACTCATA GTGATCATTT ATCAAAGAAT GACTCTGGTT ATCAAATGAT TGAACAACCG GGAACAATTT ACTTACGATA CTTAGTTGAC ATTCATAAAA AGTATCTAAT GAATTATGAG TTCAATACAT CCTGTTTAGC AGAAAGACGG ATATTCCTTG CTCATTATCA GACAATCACT TATTCACAAA CTTCGTGTGG GGCTAATAGT TTTCATTTCC CGTCTCATGG AAAACCCTTT TCGCTCCGCT TAGCCCTATC CCCCTCTAGG AGTATTTTAG TGATAGGTTC TATAGGAACT GGACGATCCT ATTTGGTCAA ATACCTAGCG ACAAACTCCT ATGTTCCTTT CATTACAGTA TTTCTGAACA AGTTCCTGGA TAACAAGCCG AAAGGTTTTT TTATTGATGA TATCGATATT GATGATAGTG ACGATATTGA TGCTAGTAAC GATATTGATC GTGAACTTGA TACGGAGCTG GAGCTTCTAA CTATGATGAA TGCGCTAACT ATGGATATGA TGTCGGAAAT AGACCGATTT TATATCACCC TTCAATTCGA ATTAGCAAAA GCAATGTCTC CTTGCATAAT ATGGATTCCA AACATTCATG ATCTTGATGT GAATGAGTCG AGTTACTTAG CCCTCGGCTT CTTATTCCAC AACAACGAAA GCACTTTTTC ACTCTTTCCT ATACTAGGGG ATTTCACTTG GAAAAGAAAA TTGCACGAGA TCTTTGCACG AGATCTTGTA GCACTTACCA ATGAGGCCCT ATCAATTAGT ATTACACAGA AGAAATCAAT TATAGACACT AATACAATTA GATCTGCTCT TCATAGACAA ACTTGGGATT TGCGATCCCA GAAGAAATCA TGTAACGAAG GGGATTCTTA TTTGTACAAA TGGTACTTCG AGCTTGGAAC GAGCATGAAG ACATTCACGA TACTTCTTTA TCTTTTGAGT TGTTCTTCCG GATCGGTCGC TCAAGACCTT TGGTCTCTAC CCGTACCCGA TGAAAAAAAT AGGATCACTT CTTATGGATT CGTTGAGAAT GATTCGGATC TAGTTCATGG CCTATTAGAA GTGCAAGGCG CTTTGGTGGG ATCCTCACGG ACAGAAAAAG ATTGCAGTCA GTTTGATAAT GATCGAGTGA CATTGCTTTT TCGCTCCGAA CCAAGGGATC CCTTATATAT GATGCAAGAT GGATCTTGTT CTATCGTTGA TCAGAGATTT CTCTATGAAA AATACGAATC GGAGTTTGAA GAAGGGGAAG GAGAAGGAGT CCTCGACCCG CAACAGATAG AGGAGGATTT ATTCAATCAC ATAGTTTGGG CTCCTAGAAT ATGGCGCCCT CGGGGCTTTC TATTTGATTG TATCGAAAGG CCTAATGAAT TGGGATTTCC CTATTCGGCC GGGTCATTTC GGGGCAAGCG GATCATTTAT GATGAAAAGT ATGAGCTTCA AGAGAATGAT TCGGAGTTCT TGCAGAGTGG AACCATGCTG TACCAGAGAC GAGATAGGTC TTCCAAAGAA CAAGGCTTTT TTAGAATAAG CCAATTCATT TGGGACCCCG CAGATCCACT CTTTTTCCTA TTCAAAGATC AACCCTTTGT CTCTGTGTTT TCACATCGAG AATTCTTTGC AGATGAAGAG ATGTCAAAGG GGCTTCTTAC TTCCCAAACG GATCCTCCTA CATCTATATA TAAACGCTGG TTTATCAAGA ATACGCAAGA AAAGCACTTC GAATTTTCAT TATCTAATGG ATTTTTCCGT TCTAATACTC GATCCGAGAG TTATCAGTAT TTATCAAATC TGTTCCTATC TAATGGAACG CTATTGGATC GAATGACAAA GACATTGTTG AAAAAAAGAT GGCTTTTCTC GGATGAAATG AAAATAGGAT TCATGTAA |
| Length | 6108 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 8601607.. 8620443 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | ATCG01280.1 |
| Description | Chloroplast Ycf2;ATPase, AAA type, core |
| TAIR curator summary | hypothetical protein |
| Alias | [YCF2.2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.28011 |
Ahg475584 | ATP synthase subunit alpha |
| 8.48528 |
Ahg907879 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 11.7473 |
Ahg925485 | DNA-directed RNA polymerase family protein |
| 12.2474 |
Ahg473737 | Protein precursor Ycf15, putative, chloroplast |
| 12.2474 |
Ahg493595 | Protein precursor Ycf15, putative, chloroplast |
| 16.0624 |
Ahg315521 | Photosystem I, PsaA/PsaB protein |
| 17.2047 |
Ahg475560 | photosynthetic electron transfer A |
| 18.0278 |
Ahg925489 | ATP synthase subunit C family protein |
| 18.9737 |
Ahg315511 | CemA-like proton extrusion protein-related |
| 21.7256 |
Ahg925484 | RNA polymerase subunit beta |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|