| Annotation |
|---|
| Description | jgi|Araly1|476028|fgenesh2_kg.2__1158__AT1G68990.1 |
| Sequence |
GCCTTCTCTT TTCTCCAGAT CTCTCTTCTC TTCACACAAG TCTTGTTCAT CGAATCTTCA CTCTTTGATT TCTATGTTTG TATTGATACC TCTACAAAAT CCAGTAGCTA CATAGCTTAC CATTTCGTGG CGATCACAAA GACGATTAAA AAATGTGGAG GAACATTTTG GGAAGAGCTT CATTGAGAAA GGTTAAGTTT TTATCTGATT CTAGCTCCGG TCCTCATTTT CAAGTGAATA GAGTTCGTGG GATTCTTTCT TCTGTTAATC TTATTGGCGT TAGAAATGGA TTATCGATAA ACCCAATTGA CGAATTTGGT GGATTGAGCT CGTTTCGTTA TGGTCAATGC TATGTGTTTG AAGGGTATGC TACAGCTGCT CAAGCTATTG ATTCGACTGA TCCTGAAGAT GAGTCTTCTG GGTCTGATGA AGTTAATGAG TTGATAACAG AAATGGAGAA AGAAACTGAG AGAATCCGTA AAAAAGCTAG GCTTGCAGCG ACACCGCCAA AGAGAGTTAT TGCGGGAATG GGAGCACAAA AGTACTATAT GCTGAGACAA AGACAAGTGA AAATGGAGAC TGAAGAATGG GAAAGAGCAG CGAGAGAGTG TCGTGAGATT CTTGCAGATA TGTGTGAGCA GAAGCTTGCA CCGAATTTGC CTTATATTAA GACTTTGTTT CTCGGCTGGT TTGAGCCTGT GCGTAATGCT ATTCAAGCTG ATCTTGATCT ATTCAAAATC AAGAAAGGGA AAATTCCGTA TGCGCCTTTT ATGGAGCAGT TACCGGCTGA TAAGATGGCT GTTATCACTA TGAATAAGAT GATGGGATTG TTGATGACTA ACGTTGAAGG TGTTGGCATT GTTAAGCTAG TTAATGCTGC TACTCAGATC GGGGAAGCCG TTGAGCAGGA GGTCAGGATC AACAGTTTTT TGCAGAAAAA TAATAAAAAA AATGCAACTG ACAAGACGAT CAATACAGAA GCTGTGCATG TTTCAGAAGA AACCGTGGCC AAAGAAACGG AAAAGGCAAG GAAACGAGCT ACTGTACTGA TGGAAAAAAA GAAGTTGAGG GAAGTAAAAG CATTAGTGAG GAAACATGAC TCATTCAAGC CATGGGGTCA AGAGGCTCAA GTGAAGGTCG GCGCACGTTT GATTCAGCTG CTGATTGAAA ATGCATATAT ACAACCTCCA GCTGAACAGT TTGATGATGG TCCACCTGAC ATCCGACCTG CTTTTAAGCA AAATTTCAGA ACTGTCACAT TAGAAAATAC AAAAACGAGC AGGAGATATG GTTGCATCGA ATGCGATCCT TTGGTCCTAA AGGGCCTTGA CAAATCAGCT AGACATATGG TCATTCCCCA CTTGCCAATG CTAATACCTC CCCAGAACTG GACAGGGTAT GATCAAGGGG CACACCTTTT CTTGCCTTCA TTCGTCATGA GAACACATGG AGCTAAACAA CAACGTACTG TAATGAAACG AACTCCAAAG GAGCAACTGG AGCCAGTGTA TGAGGCTTTA GATACTCTAG GAAACACCAA ATGGAGAATA AACAAAAAGG TGTTAAGTTT GGTGGACAGA ATCTGGGCTA ATGGAGGTCG CCTTGGTGGT CTGGTTGACC GTGAAGATGT ACCCCTTCCA GAGGAGCCGG AAAGGGAAGA CCAGGAAAAA TTTAAAAATT GGAAATGGGA ATCGAAAAAA GCAGTTAAGC AAAATAATGA GAGACATTCA CAAAGGTGTG ATATAGAGCT CAAACTCGAG GTGGCACGTA AAATGAAGGA CGAGGAAGGT TTTTACTACC CTCACAATGT TGATTTTCGT GGCCGAGCAT ATCCCATTCA TCCATATCTT AACCATCTCG GGTCTGATCT CTGCCGAGGC ATCCTTGAGT TTTGTGAGGG AAAGCCTCTT GGGAAATCAG GGTTGCGTTG GCTGAAGATA CATATAGCAA ACTTATATGC TGGTGGAGTC GATAAGCTGG CTTATGAGGA TAGGATTGCA TTTACTGAGA GTCACTTGGA CGATATATTT GATTCTTCTG ATAGACCTCT TGAAGGAAAA AGATGGTGGC TTAACGCAGA GGATCCCTTT CAATGTTTGG CTGCTTGCAT CAATCTTTCA GAAGCCTTGA GAAGCCCCTT TCCTGAAGCT GCTATATCTC ATATCCCCAT CCACCAGGAT GGTTCATGTA ATGGTTTACA ACACTATGCT GCTCTTGGGA GGGATAAGTT GGGAGCAGAT GCTGTCAACC TTGTAACAGG TGAAAAGCCG GCAGATGTTT ATGCACAAAT TGCGGCTAGG GTTTTCAAGA TCATGCAGCA AGATGCAGAG GAAGATCCTG AAACGTTTCC AAATGCCACA TATGCCAAAC TCATGCTCGA CCAGGTTGAC AGAAAGCTGG TAAAACAGAC TGTCATGACA TCAGTGTATG GTGTTACTTA TTCTGGCGCA CGTGACCAAA TAAAGAAGAG GTTAAAAGAA CGTGGTACCT TTGAGGACGA CTCACTGACT TTTCATGCAG CTTGTTATGC AGCAAAAATC ACTTTGAAAG CATTGGAAGA GATGTTTGAA GCTGCTAGAG CTATCAAGAG TTGGTTTGGT GATTGTGCAA AGATAATAGC TTCAGAAAAC AAAGCAGTTT GTTGGACGAC TCCTCTTGGA CTTCCAGTTG TACAGCCTTA TCGGAAGCCT GGAAGACATT TGGTTAAGAC TACCCTTCAG GTGTTGACTT TAAGCCGTGA GACTGATAAG GTCGCGGCGA GGAGGCAGAT GACTGCTTTT GCACCAAATT TTATACATTC TCTTGACGGG TCTCACATGA TGATGACAGC AGTTGCCTGC AACAGGGCGG GCTTGAGTTT CGCAGGGGTG CATGATTCGT TCTGGACGCA TGCCTGTGAT GTTGAAATAA TGAACACAAT ACTCAGAGAG AAGTTTGTCG AGCTCTACGA AAAGCCAATC TTAGAAAACT TGTTGGAGAG TTTCCAGAAG TCCTTCCCAG ACATAAGTTT TCCGCCATTA CCAGAACGAG GCGACTTTGA TCTGAGGAAG GTCCTACAGT CGACATACTT CTTCAACTGA GCTGCAACAC ATTCAGGTTA CTTGCATATT GGAAGGTCCA ATACTCCACA TCTAACATTC AGGGCAGAGT AAGTTTGCTT CTTCAGGCCA ATACAACATC CACATTGATC AAAGGGGAAA GATTCTCAAT AAGGAATGTT GATGGTTAAC CTCAACTCAG AGGTGGGCTT CGGTTTACTT GTAAATATAC ACAGAAAGAG TGTTTCAAAG CTTGGCAGAA GGGAAGGCAT TGGGTCG |
| Length | 3317 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 12709733.. 12715528 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G68990.2 |
| Description | male gametophyte defective 3 |
| TAIR curator summary | MGP3 (male gametophyte-defective 3) belongs to a small family of nuclear-encoded Phage type RNA polymerases (RPOTs) involved in the transcription of mitochondrial genes in Arabidopsis thaliana. Mutation in MGP 3 significantly retarded pollen tube growth and caused defective embryo development. |
| Alias | [MGP3][male gametophyte defective 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.16228 |
Ahg496683 | |
| 6.48074 |
Ahg936746 | calmodulin-binding protein-related |
| 6.48074 |
Ahg942536 | Transducin family protein / WD-40 repeat family protein |
| 6.63325 |
Ahg318448 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 10 |
Ahg496832 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 11.6619 |
Ahg490852 | N-acetyl-l-glutamate synthase 2 |
| 12.1655 |
Ahg475845 | glucosidase 1 |
| 13.0767 |
Ahg941855 | pyrimidine d |
| 14.6969 |
Ahg941057 | DNA/RNA polymerases superfamily protein |
| 16.4317 |
Ahg491484 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|