Detail



ID : Ahg476191

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476191|fgenesh2_kg.2__1321__AT1G70610.1
Sequence
TTTCGAAACG ACGCGTTTCA TTTCTTCTTC TGCATTTCAT ATGAACCAAG GAATAAGCTT GAAGCCGTGA CTCGTGGAAG CTTCTTCATC TTTAGTCCGC CGTTCATAAA TGGCTCTGCA AGTACTCGGC TGCACGAGCC GCCCAATCCG CGTCTCCCTT CACCGGTGTT CTGTTATCTC TACCAGTGAC AACATCAGAA GGAAGAATCT CCGATTTGTT AGAAACCCGA GATTGTCGTT TTCTCTTCAA TCTTCCAGTA GAAATTACCG GTTACCTTCG ATTAATTGCT CGACGGTGAA TGGAGCAGTA GCGGAAACTG CGGAATATTA CGAAGGAGAA GGAGACAACG TTTCAGTTCC TGAGAAAATT CGCCAATGTA TTGATTTCAT CCGGACGATT TTACCAGGTG GAAGCTGGTG GAGTTTCTCC GATGAGGTTG ATGGTAGGTT CATTGCAAAG CCTGTGACTG TTTGGCGTGC TTTAAGTCGG ATGTGGGAGC TTGTGGCTGA GGATCGTTGG GTTATCTTCG CTGCGTTTTC CACTCTTATC GTAGCCGCGC TTTCAGAGAT AACTATTCCG CATTTTTTAA CTGCTTCGAT CTTCTCGGCA CAAAGTGGTG ATATCGCTGT GTTTCGTCGA AATGTCAAGC TCTTGGTTAC GTTATGTGTT ACTTCAGGCA TTTGCAGTGG CATACGAGGA TGCTTCTTTG GGATTGCTAA CATGATACTT GTGAAACGAA TGAGGGAAAC ACTATACTCC ACTCTTCTCT TCCAGGATAT ATCATTTTTC GACTCTCAAA CTGTTGGTGA CTTAACAAGC AGACTTGGAT CAGATTGTCA GCAAGTCTCG AGGGTCATCG GAAATGATCT GAACATGATA TTCCGCAATG TTCTTCAGGG TACAGGGGCA TTGATTTATT TGCTAATTTT GTCTTGGCCC CTTGGGCTGT CCACATTGGT GATATGCTGT ATTTTGGCTG CGGTTATGTT CGTTTATGGG ATGTACCAAA AGAAAACAGC GAAGCTAATT CAGGAGATCA CAGCTTCTGC AAATGAAGTC GCTCAAGAGA CATACTCTTT GATGAGAACC GTTCGTGTAT ATGGGACAGA GAAGCAAGAG TTTAAAAGGT ACAATCACTG GCTTCAGAGA TTAGCGGATA TAAGTTTGAG ACAGAGTGCT GCATATGGTA TTTGGAACTG GAGCTTCAAC ACTCTATACC ATGCAACTCA GATTATTGCT GTCCTGGTTG GAGGATTGTC TATCTTAGCT GGTCAAATAA CAGCAGAGCA GCTGACAAAG TTTCTGTTGT ATAGTGAATG GTTAATCTAT GCTACATGGT GGGTGGGAGA TAATTTATCA TCTTTGATGC AATCAGTTGG AGCGAGTGAA AAGGTCTTCC AAATGATGGA TCTCAAGCCA AGTGATCAAT TCATATCAAA AGGAACAAGA CTGCAGAGAC TGACAGGACA TATCGAGTTT GTAGAAGTGT CGTTCAGCTA CCCTTCAAGA GAGGAGGTGG CGGTGGTTCA AAACGTAAGC TTGTCCGTGC ATCCTGGTGA AGTGGTAGCA ATCGTTGGTC TAAGTGGCAG TGGCAAAAGT ACACTGGTTA ATCTTTTGCT GCAACTGTAC GAACCAACAA GTGGTCAGAT TCTACTAGAT GGGGTTCCTT TGAAAGAGTT GGATGTCAAG TGGCTAAGGC AAAGAATCGG ATACGTGGGG CAGGAACCAA AGCTCTTCCG CACGGACATC AGTTCCAACA TCAAGTACGG ATGTGATCGT AATATATCGC AAGAAGATAT AATATCGGCC GCAAAGCAAG CCTATGCACA TGAATTTATC ACAGCACTGC CCAATGGTTA TAACACAATT GTTGATGATG ATCTACTCAG TGGAGGGCAG AAACAACGGA TTGCCATTGC TCGTGCCATC CTTAGAGATC CTAGAATTCT CATCCTCGAT GAAGCCACAA GTGCACTCGA TGCAGAGAGC GAACACAATG TTAAGGGTGT ACTTCGTTCT ATCGGAAACG ACTCAGCAAC AAAGAAAAGT GTCATAGTGA TAGCACACAG ACTTTCTACA ATTCAGGCTG CGGATAGAAT AGTGGCTATG GACAGTGGAC GAGTCGTCGA GATGGGCAAC CACAAAGAAC TTTTGAGCAA AGATGGCTTA TACGCAAGAT TGTCGAAGAG ACAAGCCGAT GCTGTCGTAT GATTGATCCT GCACATGCTA AACTATTCAT GAATAGTCAT GATTATGTTT TTGAATGGTC ATGACGATAA TGATGGAAAA ATTGTGTAAA GGTGTAACCA TAGAAAATTC TTATTTAACA CAAATCGTGT CGTT 
Length2344
Protein Sequence
Protein Residue
Map Locationscaffold_2: 13667290.. 13671801
Download Sequence
A.thaliana
AGI-codeAT1G70610.1
Descriptiontransporter associated with antigen processing protein 1
TAIR curator summarymember of TAP subfamily
Alias[ABCB26][ATTAP1][TAP1][ATP-binding cassette B26][transporter associated with antigen processing protein 1]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg477426
6.78233 Ahg490840 squalene epoxidase 3
7.2111 Ahg944970 P450 reductase 2
8.94427 Ahg493645 P-loop containing nucleoside triphosphate hydrolases superfamily protein
11.7473 Ahg477133 Protein kinase superfamily protein
13.8564 Ahg941228 PHYTOENE SYNTHASE
15.4919 Ahg491203
16.3707 Ahg496704 general control non-repressible 5
16.5831 Ahg904747 Protein of unknown function (DUF760)
16.6132 Ahg951334 ABC2 homolog 13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression