Detail



ID : Ahg476236

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476236|fgenesh2_kg.2__1366__AT1G71040.1
Sequence
AACTTCTCTC CTCAACTTTT AAGTATTCCA CACATACAAA CACACAAACA CACATTTCGA CAGCTCGTGA AGGACAAAGA CATGGAGCCT AAGCCTGCTC GGAGGATAAT GACCAGAGAC ATGTTCCTCC TAATCGTAGC GATGACATGG CTCGTAACCG GAGACGCAGG AGGCATAAAG GCAGAGGAGC GACTGTTCAA TCTTGAGAAG CTAGAGATGT TCGTTGACAA GCTTCCTCAT ATACCTACTC TTCATGGCTA CCACTTCGTC AATGGCTTCC TTAAACCCAA ATCTCTTAAC ATAGGCATGT TCTTCAAGAA ATGGAAATTC CACAGAGACT TGCCTGCCAC GCCAGTGTTC GCGTATGGTA CATCGAGACG TGTAGCCACA GTTCCTGGAC CGACAATAGA AGCTGTTTAT GGAGTCGACA CATACGTGAC GTGGCGAAAT CACCTTCCTT TACATCATAT CCTCCCTTGG GACCCAACAA TCTCCCCTGC AATCCCTAAA CACGGCGGCA TTCCCACCGT GGTTCACTTG CACGGCGGCA TCCACGAACC AACTAGCGAT GGAAATGCAG ATTCATGGTT CACCGCTGGT TTCAAAGAGA CAGGTTCCAA ATGGACCAAA AAGACTACGC ATTACGTTAA CAAGCAACAA CCTGGAAACA TGTGGTACCA TGACCACGCG TTGGGTTTGA CCAGAGTCAA CCTTCTCGCC GGTTTGTTAG GTGCTTACAT TCTCCGCCAC AGCTCCGTCG AATCGCCTCT CCGACTACCT ACCGGCCGTG AATTTGATCG TCCTTTGGTC ATCTTTGACC GAAGTTTTCG TAAAGATGGT TCCATTTACA TGAACGCCAC AGGGAACAAC CCGTCGATTC ACCCGCAATG GCAGCCAGAG TATTTCGGCG ACGCCATCAT TGTGAACGGT AAAGCTTGGC CGCGACTAAC CGTCCGTCGC CGGAAATATA GATTTCGGAT CACAAACGCT AGTAACGCAA GGTTTTTCCG GTTTTTTTTC TCCAACGGTC TCGAATTCAT TGTCGTGGGT TCTGATTCAG CTTACCTAGC GAAACCAGTA TCGACCAAAT CAGTTCTACT TGCTCCGTCG GAGATTATCG ACGTCGTCGT TGACTTTTCA AAGTCAACAT CGAAAACGGC AATTCTTGCC AACAATGCAC CTTATCCTTA CCCGTCGGGA GATCCCGTCA CGGAAGAGAA CAGCAAAGTC ATGAAGTTTA AAATCAAGAA CAAATCAGAA GTTGACACGT CGACTATTCC GAAGAAGCTA ATTGAATACC CGCCTGCTAA TGTATCAACC TCCTCACGTA CACGTTACAT TGCTATGTTC GAGTATGTGT CTAGCACTGA CGAGCCAACA CATCTATACA TCAACGGCTT GCCGTACAAC GCTCCCGTGA CAGAAACTCC AAAAATCGGC ACAAGCGAGG TGTGGGAAGT GATTAATTTG ACGGAGGATA ACCATCCATT GCACATTCAC TTGGGATTGT TCAAAGTATT GGAGCAAACG GCATTGGTGA ATAGTGAGGA GTTCATAGAC TGTATGACTA AAGAAAACGA TGCCGTCAAG TGTCAGATTA GCAAATACGC ACTAGGGAAC AAGACCGCGG TGACGGTACA CGAGCGGGGA TGGAAAAACG TATTCAAGAT GATGCCGGGG CATGTCACGA AGATCCTCGT CAGATTTTCT TACATTCACT CGAACGAATC TTACTCCTTT GATGCAACTC AAGAGCCAGG CTATGTCTAC CATTGTCACA TATTGGACCA TGAAGACAAT ATGATGATGA GGCCCTTTGC AATGGTGCTA TGATTCTAAA ACTAAACAAC TTATAATTAC GAGTGCAGAA TTATACAGAA AGTCTTAACT ATCATTGTTT TTAACTCGGC CACCTTTTTA ATGGGCTTTT GGGCTAACAC TTACGGGCTT TAAGGGGCCC AATAACAA 
Length1968
Protein Sequence
Protein Residue
Map Locationscaffold_2: 13896392.. 13900211
Download Sequence
A.thaliana
AGI-codeAT1G71040.1
DescriptionCupredoxin superfamily protein
TAIR curator summaryEncodes LPR2. Function together with LPR1 (AT1G23010) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.
Alias[LPR2][Low Phosphate Root2]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg944105 Tetratricopeptide repeat (TPR)-like superfamily protein
4.69042 Ahg906772 purple acid phosphatase 10
6.9282 Ahg480005 Helicase/SANT-associated, DNA binding protein
7.2111 Ahg931560 lysm domain GPI-anchored protein 2 precursor
10.9545 Ahg492803 FAD-binding Berberine family protein
11.4018 Ahg491060 RNA polymerase II large subunit
16.5227 Ahg492995 Protein of unknown function (DUF688)
17.5499 Ahg490555 GRAS family transcription factor
20.3961 Ahg490214 glucan synthase-like 5
21.5639 Ahg495077 nitrate transmembrane transporters
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression