Detail



ID : Ahg476783

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476783|fgenesh2_kg.2__1913__AT1G76300.1
Sequence
AAAAAGGAAA AGGGAAGGTT CAATTAGGGT TTAGTGAATC GAAGATGAGT CGGAGTTTGG GGATTCCGGT GAAGCTTCTT CACGAATCGT CCGGTCATAT TGTGTCGGTG GAGATGAAGA GCGGTGAGCT GTACAGAGGA AGCATGATCG AGTGTGAGGA TAATTGGAAC TGTCAGCTCG AGAACATCAC CTATAAGGCC AAGGATGGTA AGGTATCACA GCTTGAACAT GTCTTCATTC GAGGCAGTTT AGTCAGGTTT ATAGTCATAC CAGACATGCT AAAGAATGCT CCAATGTTCA AGGATGTTAG GGGCAAGGGA AAAAGCTCTT CACTAGGTGT AGGCAGAGGA AGAGGCGCTG CAATGCGAGC CAAAGGTCAA GGTACTGGAC GTGGAACAGG AGGAAGGGGA GCCGTGCCAC CTGTGAGGAG ATAGTTTAGT TAACCCTGGT AATGTAGCTT CGACTCTTGA GACAATCTCT GCAGTATCCA TGAGAATCCG CCAACTTCAG CTTGTCACTT ATGCATTTAA GGTACACAGT AAGTAAAATC TCTAACAAGA AGACAGGGAG GGAAGAGAGA AAGAGGGACC AGTTCTGTGT TTTGGGTTAC TAAGATGTTT GAAACATTGA CATGTTTTGT TCACGTGGTC ATTGAGAGAC TTCCCACATT TTATGTAGAA CAGAGCACGA TTCAAATTTC TATAATGA 
Length708
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16103081.. 16104596
Download Sequence
A.thaliana
AGI-codeAT1G76300.1
DescriptionsnRNP core protein SMD3
TAIR curator summary
Alias[SmD3][snRNP core protein SMD3]
Gene coexpression
MR
MR Locus Description
17.4356 Ahg472772 Tetratricopeptide repeat (TPR)-like superfamily protein
20.3224 Ahg494941 Ribosomal protein L13 family protein
28.1603 Ahg471459 20S proteasome beta subunit E1
31.4643 Ahg486730 ubiquitin 5
34.0294 Ahg485780 Ribosomal protein S3 family protein
39.6989 Ahg931375 Ribosomal protein L4/L1 family
48.2183 Ahg496525 adenylate kinase 1
48.9387 Ahg470426 Ribosomal protein L14p/L23e family protein
49.6387 Ahg488462 Ribosomal protein S7e family protein
50.1996 Ahg489891 Nascent polypeptide-associated complex (NAC), alpha subunit family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression