Detail



ID : Ahg476870

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476870|fgenesh2_kg.2__2000__AT1G77080.2
Sequence
AGGATTAAAT TAGGGCATAA CCCTTATCGG AGATTGAAGC CATGGGAAGA AGAAAAATCG AGATCAAGCG AATCGAGAAC AAAAGCAGTC GACAAGTCAC TTTCTCCAAA CGACGCAATG GTCTCATAGA CAAAGCTCGA CAACTTTCGA TTCTCTGTGA ATCCTCCGTC GCTGTTGTCG TCGTCTCTGC CTCCGGAAAA CTCTACGAGT CTTCCTCCGG TGACGAGATA GAAGCGCTGG TCAAGCCGGA GATAACTCAA TGTTTTGAAC TTGATCTTGC AGAAAAAATT CAGAATTATC TTCCACACAA GGAGTTACTA GAGACAGTCC AAAGCAAGCT TGAAGAACCA AATGTCGATA ATGTAAGTGT AGATTCTCTA ATTTCTCTGG AGGAACAACT CGAGACTGCT CTGTCCGTAA GTAGGGCTAG GAAGGCAGAA CTGATGATGG AGTATGTGAA GTCCTTAAAA GAAAAGGAGA TGTTGCTGAG GGAAGAGAAC CAGGTTCTGG CTAGCCAGAT GGGGAAGAAT ACGTTGCTGG CAATAGAGGA TGAGAGAGGA ATGTTGCCGG AAAGTAGCTC CGGCAACAAA ATACCGGAGA CTCTCCCGCT GCTCAAGTAA CCACCATCAT CAACGGCTTG AGTTTTCCAG CTTAAACTCA ACGCCTGATT CAGAATGAAG AAAACATATT TGTAAATTTA TAAAAAGCTG TATAATCTCA AACCTTTTAT CTTCCTCTAG TGTGGAATTA AAGGTTAAAA AACTCGATAA AGTATGGATC GTTGTTGTAC CTTCCTTCAA AGACAAGATC AGAGTTCATG TGTTTGTGTT TGAATGTACG GATTGGAT 
Length848
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16487139.. 16491683
Download Sequence
A.thaliana
AGI-codeAT1G77080.4
DescriptionK-box region and MADS-box transcription factor family protein
TAIR curator summaryMADS domain protein - flowering regulator that is closely related to FLC. Deletion of this locus in Nd ecotype is correlated with earlier flowering in short days suggesting function as a negative regulator of flowering.
Alias[AGL27][FLM][MAF1][AGAMOUS-like 27][FLOWERING LOCUS M][MADS AFFECTING FLOWERING 1]
Gene coexpression
MR
MR Locus Description
4.12311 Ahg940484 K-box region and MADS-box transcription factor family protein
17.72 Ahg491803 bacterial transferase hexapeptide repeat-containing protein
19.6214 Ahg895867
25.923 Ahg938493 AT-hook protein of GA feedback 2
29.3258 Ahg932406
30.2985 Ahg494627 Pseudouridine synthase/archaeosine transglycosylase-like family protein
33.6452 Ahg905601 F-box family protein
36.4692 Ahg471340 aspartic proteinase A1
40.4722 Ahg920195 ROTUNDIFOLIA like 17
41.4246 Ahg496802 phosphoenolpyruvate carboxykinase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression