Detail



ID : Ahg476928

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476928|fgenesh2_kg.2__2058__AT1G77640.1
Sequence
CCCAACACTT GTTCAAGCAT ATCCAAGTCA ATAACAACAT CACCACATAA CATGGTGAAA CAAGAACTCA AGATCCAAGT TACTACTTCC TCATCATCAC TCTCTCATTC TTCATCTTCT TCTTCTTCGA CGTCGGGGCT ACTTCATCAA TCTTGTAAGA ACAAGATAAA GAAGTACAAA GGAGTGAGGA TGAGAAGTTG GGGATCATGG GTTACTGAAA TTAGGGCACC AAACCAAAAG ACAAGAATCT GGTTAGGTTC TTACTCTACC GCAGAAGCAG CTGCTAGGGC TTACGATGCT GCTCTCTTGT GTCTCAAGGG ACCTAAAGCT AATCTCAACT TCCCTAACAT CACCACTACT TCTCCTTTTC TTATGAACAT CGATGAAAAG ACCCTTTTGT CCCCCAAATC CATCCAAAAG GTCGCCGCTC AAGCCGCTAA CTCCTATGTT CATGATGACG GACTCCATCG CCATCCATCT CCTTCTTCTT CAACTGCATC TTCTCCACCA GATGATGATC ATCATAATGA TGATGATGGT GATTTGGTAT CGTTGATGGA ATCTTTCGTG GACTACAAGG AACACGTGTC TCTGATGGAT CCATCATGGT ATGAATTTGA ACATAATGAG ATGTTATTCA CCAACGGAGC TCCGTTTGAT TATTCTCCAC AGTTAAATAG CTCGATGGAT GACTTCTACG ACGATGTTGA TATTCGGCTA TGGAGTTTTA GTTGATCCAA CGGTCAATAT TATTATACTA CGAAACACTT TCAATTCACA TTATTTCATT TAATTTATTC TTTTAAACTT ATCGATTATC ATTCGACGTT GTTGTTTCTT TATGTATGAA ATATACACAC ACTAATTTAA GAAGATC 
Length877
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16730759.. 16731687
Download Sequence
A.thaliana
AGI-codeAT1G77640.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryencodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg472427 Integrase-type DNA-binding superfamily protein
3.60555 Ahg497165 RING/U-box superfamily protein
5.2915 Ahg914113 Protein of unknown function (DUF1005)
5.65685 Ahg927355 organic cation/carnitine transporter 2
7.54983 Ahg922473
15.8745 Ahg481588 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
17.8885 Ahg473657 Phosphate-responsive 1 family protein
23.3666 Ahg482493
27.5681 Ahg483577 O-fucosyltransferase family protein
30.5123 Ahg900381 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression