Detail



ID : Ahg476933

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476933|fgenesh2_kg.2__2063__AT1G77690.1
Sequence
AGAGAAGAAG ATAAAAATGG CGGCAGAGAA AATAGAGACA GTGGTCGCAG GGAATTACTT GGAAATGGAG AGAGAAGAAG AAAACATAAG TGGTAACAAT AAATCTTCAG CTAAAACAAA ACTTTCCAAC TTCTTCTGGC ATGGAGGTTC TGTCTACGAT GCTTGGTTTA GTTGTGCTTC AAATCAGGTG GCACAAGTTC TGTTGACATT ACCGTACTCG TTCTCACAAC TTGGGATGGT GTCGGGAATT TTGTTTCAAC TCTTTTATGG ACTAATGGGA AGTTGGACTG CTTATCTCAT TAGTGTTCTT TACGTTGAAT ATCGAACTCG TAAAGAACGA GAAAAATTCG ATTTCCGTAA TCACGTTATT CAGTGGTTTG AGGTGTTAGA TGGATTGTTG GGGAAACATT GGAGGAACCT TGGATTGATC TTTAACTGCA CTTTTCTTCT CTTTGGATCC GTTATTCAGC TCATTGCTTG TGCTAGCAAT ATATATTATA TTAATGACAA ATTGGACAAG AGGACATGGA CATACATATT TGGGGCGTGT TGTGCAACAA CTGTTTTTAT TCCTTCCTTC CACAATTATA GAATTTGGTC ATTCCTCGGA CTCGCTATGA CCACTTACAC TTCTTGGTAT CTCACCATTG CTTCACTCCT TCATGGCCAG GCTGAGGATG TGAAACACTC GGGTCCAACC ACAATGGTGC TTTACTTCAC CGGAGCCACC AACATTCTCT ATACCTTCGG TGGACACGCC GTCACAGTGG AGATAATGCA CGCGATGTGG AAACCACAAA AGTTCAAGGC GATATATCTA ACTAGCGACC ATATATGTAC TAACGCTAAC GCTACCATCC GCCTACTAAC TCATTCCAAT GCGCTCTCTC TTCTCCCTAA GTCCGGTTTT AGAGATACCG CAGTGATCCT CATGCTCATT CATCAGTTTA TAACATTCGG ATTCGCATCT ACACCGTTAT ATTTTGTGTG GGAAAAATTG ATAGGTGTGC ATGAGACGAA GAGCATGTTC AAAAGAGCCA TGGCTAGATT ACCCGTGGTT GTACCCATAT GGTTCTTAGC CATTATCTTC CCCTTTTTCG GACCAATCAA TTCCGCCGTC GGATCTCTCT TAGTTAGCTT CACTGTATAC ATCATCCCCG CATTGGCTCA TATGCTTACC TTTGCTCCTG CTCCTTCAAG AGAGAACGCG GTGGAGAGAC CACCGCGAGT GGTGGGAGGA TGGATGGGGA CTTATTGCAT AAACATATTT GTGGTGGTTT GGGTATTCGT AGTTGGGTTC GGGTTCGGAG GATGGGCAAG TATGGTCAAC TTTGTTCGCC AGATCGACAC TTTTGGTCTC TTTACTAAAT GCTACCAATG CCCTCCTCAC AAGCCATGAT ATACAAATTT GCCATTCAAG ACCTTCTAGA AAGAGAGTTT CATCTGAGTG GGTTTTGTTT TCGAAATCTA ATACATATAA GTTATTATAT CCATTTTTTA GTATTTATTA AAAATCACAT CTCTTTGTAA TTGTTTGACG ACAATAATCT TTTACTTCGT TTTTTTTTTT TTTAATTTGT TATGTTGAGT TGTTTTTGGT AAATTGGGTT TTTTTTTTTG TTCCTTAGTT AAGGTGTGAT GGCTATCTTA GGCCAACCCT ATTATTAAT 
Length1669
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16753257.. 16755617
Download Sequence
A.thaliana
AGI-codeAT1G77690.1
Descriptionlike AUX1 3
TAIR curator summaryEncodes an auxin influx carrier LAX3 (Like Aux1) that promotes lateral root emergence. Auxin-induced expression of LAX3 in turn induces a selection of cell-wall-remodelling enzymes, which are likely to promote cell separation in advance of developing lateral root primordia.
Alias[LAX3][like AUX1 3]
Gene coexpression
MR
MR Locus Description
18.4932 Ahg490781 Pentatricopeptide repeat (PPR) superfamily protein
22.2486 Ahg311401 Phototropic-responsive NPH3 family protein
28.9482 Ahg905790 ATP-dependent protease La (LON) domain protein
32 Ahg947216 Carbohydrate-binding X8 domain superfamily protein
33.6749 Ahg473363 ATP-binding cassette 14
33.8821 Ahg497370 Mitochondrial transcription termination factor family protein
43.1277 Ahg487228 cyclin-dependent protein kinase inhibitors
48 Ahg493792 GRAS family transcription factor
51.7494 Ahg946685
55.3895 Ahg478003
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression