Detail



ID : Ahg477163

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477163|fgenesh2_kg.2__2293__AT1G80770.1
Sequence
GTCAAGCCAG GGGTCTTGGA TTAGATCGTT AAAGTTTTTA TCTTTCTTGT TCGGAACTCA GAAACACGAT GAAATTGGCC TCGAGCTTGG TTCCTCATCA GTGGCGTCTT TTAACATCAC CACAGCTTTC TCTACAAGCT CTCATTTTTT CTTCAGCCAA CACCCCAAAG TCTCACACTT TCTGGTCTCC AACTTTGCGT CAATGTCGAA ATCTTCAGAC GGCTGTTTCT CCAATCGTCA GTTCAAGCTA CTTGCCCACT TCCTACATCA CTCAGAAGCA GATTGAAATC CCTACCTCCC CTGAAAAACA ATCGCCACCA GTGCAGGAAG GTTTGGGTGC TTTTCAAAAA CTGCCCATGG TGATGCCATC TATTGATTTA TATTGTTCTG CTCTCAGGAA GTCCAAAAGA GTCCAACCAA CTAAAGGCAT TGCTAATATT GCAAAGCGAG AAAGAAATAG AGGTGCTAAA CAGCTTGATG CATTCATGAA AGAACTGGCT CTTCCTTTAA AAGGATACAT GGAAAGTTTT CCGAGGAAGA GACTCCTGCA TCCATATGAA AGGTCTCTTA TTAACTTGAC ACTTGGTGAT GGGAAGTATG AAGAGGTGTT AGGGAAAGTT GATGTTCTGA GGAAAAAGGT GCTATCTGTT GGAAAGGAAC ATGCTTCTCT CTGCGCCAAG GCTTTGTCAA AGAAAGAAGC AGAGGAACGC TTGAACGAAG GTGTGGAGAA GCTTGAACTG GTTTTCCAAC AACAAGGGAG AGCTGTTGAT GATTTGCTAA GTATAGCGAA GGTTTTGAGG GCTATGCCAG TTGTTGACTT GGAAATGCCG ACTCTTTGCC TTGTCGGAGC ACCAAACGTT GGCAAATCAT CGTTGGTCCG CATTCTTTCA ACAGGGAAGC CTGAGATTTG CAATTATCCT TTCACAACCA GAGGAATTCT GATGGGTCAC ATCGTTTTAA ACTACCAACG ATTTCAGGTT ACAGACACCC CTGGCCTTCT TAGGAGATGT GATGAGGATA GGAATAATCT AGAGAAGTTA ACTCTTGCTG TACTCACTCA TCTTCCAACC GCGGTTCTAT ATGTTCATGA TCTAACTGGA GAATGTGGGA CTTCTCCTTC TGATCAGTTT CGAATTTATA AAGAGATGAA AGAGAGGTTT AAGGATTACC TGTGGATTGA TGCTGTGTCC AAATGTGATC TGCTGGGAGG CTCACCGGTG ATGTATGCCA AAGAAGATAG AAGCAGCGAT GACGCGGAAA TCATTAAGTA CAGAGAAACA GGACCTGATG AATCAATTCA TGTCTCGGTG AAAACAGAAC AAGGTCTCAA TGAGCTAAAG AACAAAGTGA AGGAAGTACT GAGTAATGAG ATGGAGAAGA TCAAAAGTGG AGATAAAATT GATCAAAGTG TTGGTACTTG TTAGATAGAG ATTTTAAATA GGATTAAATC GTTAATGCAT CATATATACA TGGCTATTTC TCTTATTTAC TAGTTGCGAA TCTGCTGATT TGCATATATA TATATATATA TAT 
Length1533
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17810022.. 17812654
Download Sequence
A.thaliana
AGI-codeAT1G80770.1
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summary
Alias[PDE318][pigment defective 318]
Gene coexpression
MR
MR Locus Description
7.07107 Ahg486638 Phosphoenolpyruvate carboxylase family protein
11.225 Ahg324562 AT hook motif DNA-binding family protein
11.7898 Ahg471430 P-loop containing nucleoside triphosphate hydrolases superfamily protein
14.4222 Ahg480618 Uncharacterised conserved protein (UCP030210)
17.9444 Ahg949921 myosin heavy chain-related
21.2132 Ahg490654 FMN-linked oxidoreductases superfamily protein
22.0454 Ahg931587 Uncharacterised conserved protein (UCP030210)
28.3373 Ahg491904
29.8329 Ahg928581
33.7639 Ahg939512 Protein of unknown function, DUF647
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression