| Annotation |
|---|
| Description | jgi|Araly1|477298|fgenesh2_kg.2__2428__AT1G79730.1 |
| Sequence |
AAGTACACCG AGAATGGCGT CGTACAGGCC GCCGTATCCT CCTCAAAATC CTTTGGCCCC TCCGCCTCCT CCGCCGTCTT TACCCCCTCC TGTTCCTCCC CCACCACCGT CGCATCAACC GTACTCTTAT CCTCCGCCGC CTCCCCCTCC GCATGCTTAC TATCAGCAGT ATCCTCAATT CAACCAGGTC CAAGCTCCTC CTCCTCCACC TCCACCTCCC TCAGCTCCTC CTCCCCTCGT ACCCGATCCT CCTCGAAATC AAGGGCCCAA TGACCGCGAC AAAGGGGCCT CGAGGCGGGA GCGTGCTAAA CCGGATCCAT CGAAGCACCA CAGGTCTCAT CTTCCCCATA CTAAGAAAAT CGAGACCGAA GAAGAGAGGA GGCTTAGGAA GAAGAAGGAG TTAGAGAAAC AAAGGCAAGA AGAAAAACTT AGACAGCAGA TGAAAAATTC TCACAAGTCT CAGATGCCCA AGGGACACAC GGAGGAGAAG AAGCCGACGC CTCTACTCAC CACCGACAGG GTCGAGAATA GGTTAAAGAA ACCAACCACC TTCATCTGCA AGCTCAAGTT CCGGAATGAG CTCCCTGACC CTAGTGCTCA GCTTAAGCTT ATGACCATTA AGCGGGATAA AGATCAATTT ACAAAGTATA CCATCACATC GCTGGAGAAA TTATGGAAAC CAAAAATCTT TGTCGAGCCT GATCTTGGAA TACCCTTGGA TCTGCTTGAC CTAAGTGTAT ACAACCCTCC CAAATTCAAG GCACCTCTTG CCCCTGAAGA TGAAGAACTG CTGCGTGATG ATGATGCTAT TACACCTATT AAGAAAGATG GCATCCGGAG AAAAGAAAGG CCAACTGATA AAGGTGTTTC CTGGCTCGTG AAAACACAAT ACATTTCTTC TATTAATAAT GAATCGGCAA GACAGTCGCT AACTGAGAAA CAAGCAAAGG AACTGCGAGA GATGAAAGGA GGCATCAACA TCTTGCACAA TCTTAACAAT AGAGAGAGAC AAATCAAGGA TATTGAAGCA TCCTTTGAAG CATGCAAGTC TCGACCAGTT CATGCCACCA ATAAAAGCTT GCAGCCGGTT GAAGTTTTAC CACTGTTGCC ATATTTTGAT AGGTACGATG AGCAGTTTGT GGTAGCGAAT TTTGATAGTG CTCCTACAGC TGATTCTGAA TTCTTTGGCA AGCTAGACCC ATCAATTCGT GATGAACATG AGTCACGGGC CATTTTGAAA AGCTATGTGG TGGCTGGATC AGACACTGCC AATCCAGAAA AATTTCTGGC GTACATGGTT CCTTCGTTGG ATGAGTTGTC TAAGGATATG CATGATGAAG ACGAAGATAT CTCTTACACT TGGGTTCGCG AATACCACTG GGATGTACGT GGTGATGATG CAAATGATAT TGGCACATAC CTGGTATCGT TTGATGATGG GGCCGCTAGC TATCTGCCCC TACCCACGAA GCTGAACTTG AGGAAGAAAA GGCCCAGGGA AGGAAGATCT TCTGATGAGA TTGAACACTT TCCAGTACCT TCAAGGGTGA CTGTAAGGCG AAGATCAACT GTATCAGTGA TCGAACATAA AGATTCAGGG GTTTACTCTT CTAGGGTTGG TGCTTCGAGC TCCAAGATGA GAAGATTAGA GGACGAAGAA GGCCTTGGTA GATCTTGGAA ACATGAGCCG GAACAAGATG CCAATCAATA TAGTGATGGT AATGAGGATG ATTATTCTGA ATGAACGTTT TATGTACTTC AAACTATTCA ATCGGTTTTC CAATGGTGTG TGAAGTATCC TGCAAGGCTA CTTTTAGGCT AATTTAAAGC GTAATATGGC CTCGACCAGA GCCTCGTAAT TTGGCAAGTA AAGAAATATT GATTTGGATA GCTGGCGAAG CTGAAAAACG ATTTGACATG TACACGTCCA T |
| Length | 1931 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 18220711.. 18224112 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G79730.1 |
| Description | hydroxyproline-rich glycoprotein family protein |
| TAIR curator summary | Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin. |
| Alias | [ELF7][EARLY FLOWERING 7] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg339115 | tRNA arginine adenosine deaminase |
| 5.47723 |
Ahg318448 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 6.16441 |
Ahg920427 | |
| 6.9282 |
Ahg486740 | Carbohydrate-binding-like fold |
| 11.4891 |
Ahg933494 | Pleckstrin homology (PH) domain superfamily protein |
| 11.8322 |
Ahg920022 | Predicted pyridoxal phosphate-dependent enzyme, YBL036C type |
| 13.5647 |
Ahg475897 | PAS domain-containing protein tyrosine kinase family protein |
| 16.1245 |
Ahg488046 | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein |
| 16.4317 |
Ahg473066 | syntaxin of plants 61 |
| 19.3649 |
Ahg493292 | Dynein light chain type 1 family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|