Detail



ID : Ahg477440

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477440|fgenesh2_kg.3__141__AT3G02110.1
Sequence
AGACAAGCTA AAGGTAGAAC TGTAGAAGCC AATCTCAAAA GTCTCCGACA CTCTCTAGAT TTCCTTTTCT CCTTCTTTCT GGCCATGGCA ATGGCAAAAC ACGTAATTTT CACCACTCTC ATGGCCATAC TTGTAATGAC ATCTCAAGGA AGAATTCCAA CAGGAGGAGA GAAAGAAGCA GAGGCTGACC GAATTACGTC ACTTCCAGGT CAGCCTAAAG TCACGTTCGA GCAGTTTTCC GGCTATGTCA CCGTCGATAA ACTCTCCGGA AGATCACTCT TTTACTGGCT CACCGAAGCT TCTGACCTCC CTCTCTCCAA ACCTCTCGTA ATTTGGCTCA ACGGAGGACC GGGGTGTTCG TCGGTAGCGT ACGGTGCGTC GGAGGAGATT GGACCATTCA GGATAAGCAA AGGTGGTTCC GGTTTGTATC TCAACAAATT CGCTTGGAAC TCAATCTCCA ATCTCTTGTT CCTCGAAGCT CCTGCCGGCG TTGGCTTCTC TTACACTAAC CGCTCCTCCG ATCTATTCAA CACCGGCGAT CGTCGTACCG CCAAAGATTC ACTTCAGTTT CTTATTCAAT GGCTTCACCG GTTTCCGAGA TACAACCACC GAGAAATCTA CATCACCGGC GAGAGTTACG CCGGACATTA CGTTCCTCAG CTCGCCAAAG AGATCATGAA TTACAACAAA CGATCAAAGA ATCCGTTAAA TCTCAAAGGA ATCATGGTTG GAAACGCGGT GACAGACAAT CACTATGATA ACCTCGGAAC GGTGTCGTAT TGGTGGAGCC ACGCGATGAT CTCTGATCGG ACGTATCATC AGTTAATAAA CACTTGCGAT TTTAGTCGCC AGAAGGAATC TGATGAATGT GAAACCCTTT ATTCTTACGC TATGGAGCAG GAGTTTGGTA ACATCGATCA GTACAACATC TATGCACCGC CGTGTAACAA GTCAAGTGAC GGTGGTGGTG GCTACACTGG TTCATCCGGC CGCCGGAGTA TGCGGCTTCC TCACCTTCCC CACTCCGTAT TGAGGAAAAT TTCCGGTTAT GATCCGTGTA CGGAGAGATA TGCAGAGATC TATTATAACC GGCCTGATGT TCAGAAAGCT CTTCATGCCA ATACCACCAA GATTCCATAT AAATGGACAG CTTGCAGTGA GGTGCTAAAC CGGAATTGGA ATGATACAGA TTCAACGGTT CTCCCTATAT ACCGGGAAAT GATTGCCGGC GGGATTAGAG TTTGGGTTTA CAGTGGTGAC GTCGATTCAG TTGTACCAGT GACAGCTACT AGATACTCAC TAGCAAGACT TAGTTTGAGT ACCAAACTTC CTTGGTATCC TTGGTACGTC AAGAAACAGG TCGGCGGATG GACGGAAGTG TACGACGGAC TAACGTTCGT GACGGTGAGA GGAGCAGGTC ACGAGGTGCC ATTGTTCAAG CCACGTGCTG CTTTTGAGCT ATTTAAGTAT TTCTTGAGAG GCAAGCCACT TCCAAAGGCT TGAAAAACAT TGAAGTCAAG AGAGATTGTA ACATTTTAAA TCATGCCCGA GAGAAAAGAA AATGTAAAGT TTGGGTTATG AGATGGTATT TAATTAAGTC TTAGTCTATT ATTGACAACA AGTATTTAAT TATTTAGCCT AT 
Length1642
Protein Sequence
Protein Residue
Map Locationscaffold_3: 424186.. 427205
Download Sequence
A.thaliana
AGI-codeAT3G02110.1
Descriptionserine carboxypeptidase-like 25
TAIR curator summary
Alias[scpl25][serine carboxypeptidase-like 25]
Gene coexpression
MR
MR Locus Description
7.74597 Ahg489149 FRA8 homolog
8.3666 Ahg477690 Li-tolerant lipase 1
10 Ahg926666 Glucose-methanol-choline (GMC) oxidoreductase family protein
10.7238 Ahg494701 Leucine-rich repeat protein kinase family protein
13.5647 Ahg491360 Transducin family protein / WD-40 repeat family protein
15 Ahg470654 Fatty acid desaturase family protein
15.8745 Ahg471298 cytochrome P450, family 77, subfamily B, polypeptide 1
16.4317 Ahg945123 Putative membrane lipoprotein
16.5227 Ahg482818 glycerol-3-phosphate acyltransferase 6
18.3303 Ahg490341 glycosyl hydrolase 9B13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression