Detail



ID : Ahg477481

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477481|fgenesh2_kg.3__182__AT3G02468.1
Sequence
ACGAACGCAT CTCATTGCTT CATCATTACC AAATCATCAT TTATAATCGT TTCTCTCAAA TTTAGGGTTT CTTGCGTTTT TCTGAATTCA TCTTTATCTG GTTTGAGGGT TTCGTTTGAT ATCTGGAAAA AGGGGTTTCT GGAAACAAGG AGTTCATAGT TCGCGATCTA GATCTATCGA TCTTCATTTA TATGTAAAAG CGTGAATGAG ATTATGATGG AGTCGAAAGG TGGTAAAAAG AAGTCCAGCA GTAGTAGTTC CTTATTTTAC GAAGCTCCCC TCGGTTACAG CATTGAAGAC GTTCGTCCAA ACGGTGGAAT CAAGAAATTC AAATCTTCTG TCTACTCTAA CTGCTCCAAG AGGCCATCCT GAGTACCAGC GTGCACCGAT CTTCTTAATA TAGTTATAGC TTTCTTTACT TTCCAGTTTA TAATTTTCTT CTTTCAAAGC TCCCTTTCTG CTGGTTCCCG GATCCAATCG TTCTCTCCTC CTACTACAAG TCCTGTCGCT CACACAACAA GGCGAGATGG CCTTATCTGC AATCGGTTTC GAAGGTTACG AGAAACGGCT CGAGGTTACT TTCTTTGAGC CAAGCATCTT TCAAGACTCC AAGGGACTGG GACTCCGTGC TCTTACCAAG TCCCAGCTTG ATGAAATTCT TACACCTGCT GCATGCACGA TCGTTTCTTC TCTCTCCAAC GATCAATTGG ACTCTTACGT ACTCTCTGAG TCCAGCTTCT TTGTCTACCC CTACAAAGTC ATCATCAAGA CTTGCGGTAC CACGAAGCTC CTCCTCTCTA TCCCACCACT TCTAAAGCTG GCTGGTGAGC TCTCTTTGAG TGTCAAGTCT GTGAAGTACA CTCGTGGCTC CTTCCTCTGC CCCGGAGGCC AGCCTTTCCC TCACCGCAGC TTCTCTGAAG AAGTCTCTGT TCTTGATGGG CACTTTACTC AGCTGGGCTT GAACAGCGTA GCCTACTTGA TGGGCAATGA TGATGAGACT AAGAAATGGC ATGTCTATGC TGCCTCTGCC CAGGACTCCA GCAACTGCAA CAACAATGTC TACACTCTCG AGATGTGCAT GACTGGTCTG GACAGAGAGA AAGCTTCTGT CTTCTACAAG AACGAAGCTG ACAAAACTGG GTCAATGACT GACAACTCTG GAATCCGAAA GATCCTTCCC CAGTCCCAGA TCTGCGACTT TGAATTCGAG CCCTGTGGCT ACTCTATGAA CTCAATTGAA GGGGATGCAA TCTCCACGAT CCATGTGACC CCTGAAGATG GGTTTAGCTA CGCTAGCTTT GAAGCTGTGG GTTACGACTT CAACACTATT GACCTGAGCC AGCTGGTGAC AAGGGTACTC TCTTGCTTCG AGCCCAAGCA ATTCTCTGTA GCTGTGCACT CGAGCGTTGG AGCGAACGCG TACAAGCCAG AGATCACTGT AGACTTGGAA GACTATGGGT GCAGAGAGAG GACATTTGAG TCTCTAGGAG AAGAGAGTGG AACAGTGATG TATCAGACGT TTGAGAAGCT TGGTAAGTAC TGTGGATCGC CTAGATCTAC CTTGAAGTGT GAATGGAGCA GCAACAATAG CTGCAGCAGC GAGGACGAGA AGGACGAGGG AATCTAGCAG AATTTTCTTC CTAATAACTA TTTTCGAGCT TTCTGTTTTT GCTTTTTCTT TTTAAAAAAC T 
Length1691
Protein Sequence
Protein Residue
Map Locationscaffold_3: 577579.. 579875
Download Sequence
A.thaliana
AGI-codeAT3G02468.1
Descriptionconserved peptide upstream open reading frame 9
TAIR curator summaryUpstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF9 represents a conserved upstream opening reading frame relative to major ORF AT3G02470.1
Alias[CPuORF9][conserved peptide upstream open reading frame 9]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg470177 Homeodomain-like superfamily protein
3.74166 Ahg490876 cytochrome P450, family 91, subfamily A, polypeptide 2
8 Ahg482070 salt tolerance homologue
8.12404 Ahg488445 conserved peptide upstream open reading frame 10
8.48528 Ahg944252 ferulic acid 5-hydroxylase 1
8.94427 Ahg485852
12.49 Ahg931833 arginine decarboxylase 1
14.8324 Ahg494217 tonoplast dicarboxylate transporter
15.4919 Ahg934945 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
21.6333 Ahg493346 ERD (early-responsive to dehydration stress) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression