Detail



ID : Ahg477525

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477525|fgenesh2_kg.3__226__AT3G02830.1
Sequence
TGGAGGTGAG ACGAGAACGC TTTTTTGCTT TTTCGTCTTT CTCTCTCTCT CTCTCTCTTT CTTCACTACC CTCTCACCTC TCTGTTTACA CGATTCTTCT TAGATGTCTT CTTCCTCCAT TGTCATTTAC CTATCTACAC TTCATTTTCT TGTCGGAGGA AGATCGATTA TCGGTGATTC ATTCTTAGTG ATGACAGTAT AATGTCTGAT GCTTATCATC ATCATCATCA TCATCGGAGA CATTCTTCCT CTTCACGTCT ATGGATTTTA ATGCCGGAGT TCCCATGTCT TCTCTTTCAC CTTTAATGAA TCAAGATGCA ATGTGGCAAA TGAATTTGAG TTCAGATGAA ACAATGGAAA CTGGTTCCTA CCCTGAACGA CCAGGAGAGC CTGATTGTTC TTATTACATA AGAACTGGAC TTTGTAGATT TGGCTCTACT TGTCGGTTCA ATCATCCTCG TGATCGGGAA CTGGTTATAG CCACTGCAAG GATGAGAGGA GAGTACCCTG AAAGGATTGG TCAGCCTGAA TGCGAGTACT ATTTGAAGAC AGGAACCTGC AAGTTTGGAG TAACATGTAA GTTTCATCAT CCTAGGAACA AAGCTGGTAT TGCTGGAAGA GTCTCTCTCA ATATGTTAGG CTATCCTCTC CGCTCGAATG AAGTTGATTG TGCTTATTTT CTAAGAACCG GACATTGTAA ATTTGGTGGT ACTTGTAAAT TCAACCACCC TCAGCCTCAA CCAACCAACA TGATGGTTCC AACTTCAGGC CAACAGTCTT ATCCTTGGTC AAGAGCTTCT TTTATTGCCA GCCCTCGTTG GCAAGATCCG TCTAGCTACG CTTCCTTAAT CATGCCTCAA GGAGTTGTCC CGGTTCAAGG ATGGAACCCT TACAGTGGTC AGCTCGGCTC AGTTTCTCCT TCAGGTACCG GAAATGATCA CAACTACAGA AACATACAGC AGAACGAGAC AATAGAGTCA GGCTCTCAGT CTCAAGGGTC ATTCTCGGGT TTCAATCCGG GATCCTCTGT TCCGATAGGA GGGTATTATG CATTGCCGAG GGAAAATGTG TTCCCGGAAA GACCAGGACA ACCCGAATGC CAATTCTACA TGAAGACAGG TGACTGCAAA TTTGGCACAG TTTGCAAGTT TCACCATCCT AGAGACAGAC AAGCTCCTCC TCCTGATTGT CTCTTAAGCT CCATTGGCCT CCCTTTACGC CCGGGAGAAC CGTTGTGTGT GTTCTATACT CGATATGGAA TCTGCAAATT TGGTCCAAGC TGTAAATTTG ATCACCCAAT GAGAGTATTC GCATACGAGA ACACAGCTTC AGAGACAGAT GAGGTAGTGG AAACATCAAC AGGGCAATCC AGAAGACACT CTGTATCTGA AACAAGACAA GCAGCAACAA CATCCTCTGG TAAAGATACT ACCATTGATA ATACACAGCA GTGAAGAAAC AAAAAGAAGA AGAGCTTTGA TTTTTCAAAA GAGGAATCTG TAAATTGTCA TTTTCATTTA GTCTCTCAAG CATTTATTAA TAATGTATAG AGGTGATTTA TACAACTGAT CTTGATCTTG ATCTGATGGC CATTGTTGTA ATATTCTTTT GGCGAATCAG GTTGAATAAA ATTGAAAGTA ATTTCCCTC 
Length1649
Protein Sequence
Protein Residue
Map Locationscaffold_3: 700516.. 702835
Download Sequence
A.thaliana
AGI-codeAT3G02830.1
Descriptionzinc finger protein 1
TAIR curator summaryEncodes a zinc finger protein.
Alias[PNT1][ZFN1][PENTA 1][zinc finger protein 1]
Gene coexpression
MR
MR Locus Description
12.3288 Ahg472217 Pseudouridine synthase/archaeosine transglycosylase-like family protein
15.3297 Ahg922337 Single hybrid motif superfamily protein
15.4919 Ahg475549 structural constituent of ribosome
29.4109 Ahg950641 Major facilitator superfamily protein
32.4037 Ahg486907 Tautomerase/MIF superfamily protein
38.1051 Ahg491980
38.3014 Ahg495239 2 iron, 2 sulfur cluster binding
38.4578 Ahg940828 magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH)
41.8091 Ahg938046 UbiA prenyltransferase family protein
42.8952 Ahg934209
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression