Detail



ID : Ahg477956

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477956|fgenesh2_kg.3__657__AT3G06510.1
Sequence
ATTCAATGGG CCCTTAATGG GCTCTTTTGT CATAAACCCG TTTTGTTTTA TCTTTCATCG GCGATTATGG AATTAGTCGC ATTGCTTATT AAGGTCGCCG GTCTTGTGGC CACTATCACC GTTGGAGCCA ACGCATTTTC CTACTCTCGG TTCCGTCGCC AGAATCTCGC GAAGTTTCGC TCTCCAATCG ACGAATCTAA AGAAGTTCTC GCCGATTTCA ATTCCATTGA ACACAAGGAA GGCAAGTTCT TCTTTGGGTT GGCTACTGCA CCTGCTCATG TGGAGGATGA TCTAGATGAT GCTTGGCTCC AGTTTGCAAA AGAAACTCCA TGTTCAGCAT CAGATGCAGA GGCTGCTGAT AAGAAAGCTA AGAGGAAGAA GGTTAAGCTT GCTGTGGGAG CTATAACCAA AGGCTTGGCC AAGAACTCAC ATGGAAAAGA AGATAAGACT GCAGCTGATA AGCCACCCTC TAAAAATGTG GCTGCGTGGC ATAACGCTCC TCACGCCGAG GACAGGCTTA AATTTTGGTC AGATCCTGAC AAAGAAGTGA AGCTAGCCAA AGATACTGGC GTTACTGTCT TTAGGATGGG AGTCGATTGG TCTAGGATCA TGCCAGTAGA GCCTACCAAA GGAATTAAGG AAGCAGTTAA CTATCAGGCT GTCGAACACT ATAAATGGAT ACTTAAAAGA GTTCGTTCAA ATGGAATGAA GGTGATGCTA ACGCTGTTTC ATCATTCATT GCCACCATGG GCAGCTGATT ATGGTGGCTG GAAAATGGAG AAGACAGTCG ACTACTTTAT GGACTTTACC AGGATTGTTG TGGATTCCAT GTTTGATTTG GTAGACTCTT GGGTAACATT TAATGAACCC CATATCTTCA CCATGCTTAC CTACATGTGT GGGTCTTGGC CCGGTAACAA CCCTGATTTT CTGGAGATTG CTACATCTAC TCTACCAATG GGTGTATTCC ATCGAGCCTT ACACTGGATG GCTGTTGCTC ACTCAAAGGC CTATGACTAC ATCCATGGGA AAATTTCCTT GAAAAAACCT TTGGTAGGTG TTGCGCACCA CGTCTCCTTT ATGCGACCAT ATGGGCTCTT TGATATCGGG GCCGTTACTA TTAGTAATTC CCTCACTCTA TTTCCATATA TCGATAGCAT TTGTGAGAAG TTGGATTTCA TAGGCATCAA CTACTACGGA CAGGAAGCAG TATGTGGTGC TGGACTAAAG CTTGTAGAGA CTGATGAATA CAGTGAATCT GGAAGAGGGG TGTATCCTGA CGGACTCTAC CGGGTGTTGT TGATGTTCCA CGAGAGATAC AAACACCTGA AAGTTTCTTT CATCGTCACA GAAAATGGTG TGTCTGATGA AACAGATGTG ATTCGACGAC CTTACCTGAT CGAGCATCTC CTTGCCCTAT ATGCTGCAAT GCTAAAGGGT GTTCCTGTGC TCGGTTACAT ATTCTGGACT ATTTCCGACA ACTGGGAATG GGCTGATGGA TATGGTCCAA AATTTGGACT TGTTGCGGTT GACCGATCCC ATAATCTTGC CCGAACCCTT CGGCCATCGT ACCATCTCTT TTCCAAGATA GTTAAAAGTG GAAAAGTCAC TCGTAAAGAC CGGTCTCTTG CATGGAACGA ACTCCAAAAA GCTGCCAAAG CAGGAAAACT ACGGCCATTC TACCGAGCCG TTGATAATCA TAATCTTATG TACGCAGATG GTCTCGACAA GCCTCAATGG AGACCGTTTG TCGATCGTGA CTGGCGGTTT GGTCATTACC AAGTGGATGG TCTTCAAGAC CCATTGAGTC GCGTGGCTCG AACCCTTCTC ATATGGCCAC TAATCATGAA AAAGAGGATA AGAAAAGTTA AGATAAAGCA CACCGATGAT GCTGGGCTCG TTCTACATCC CGCTTTAGCC TCACCCTTTG ACTAGAGAAA GAGAGTAGAA GAAACCCGAG TGTACAAACT CTTTTCCCTG TACGATTTGC CAAAACTTTG GGACGATTCA CCGTTTTGTT GTTAATGTTT AAATAAAGGC AAAACGGCAC GATGTTAACG ATATTTGGTT GGACCAATGA ATCGCAGGCT TAACCGACCC AATGTCCGGT TTTTGTT 
Length2117
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2516480.. 2519831
Download Sequence
A.thaliana
AGI-codeAT3G06510.2
DescriptionGlycosyl hydrolase superfamily protein
TAIR curator summaryEncodes a protein with beta-glucosidase activity, mutants show increased sensitivity to freezing
Alias[ATSFR2][SFR2][SENSITIVE TO FREEZING 2]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg489353 CONSTANS-like 4
6.63325 Ahg478176 protein-serine kinase 1
9.79796 Ahg935667 circadian clock associated 1
15.0997 Ahg496704 general control non-repressible 5
15.4272 Ahg940842 Pentatricopeptide repeat (PPR-like) superfamily protein
15.4919 Ahg470724 Calcineurin-like metallo-phosphoesterase superfamily protein
23.4947 Ahg476523 B-box type zinc finger protein with CCT domain
25.6515 Ahg479172 high chlorophyll fluorescent 107
26.533 Ahg324943 LHY/CCA1-like 1
29.9333 Ahg483787 SPA (suppressor of phyA-105) protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression