Detail



ID : Ahg477966

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477966|fgenesh2_kg.3__667__AT3G06590.1
Sequence
GAGATCAGAA CCAATTCTCT GTTTATGGCG TCTCTGATCT CAGATATTGA ACCGCCGACG ACAGATCTCG TTCGGAGGAA GAAGAGATCC TCTGTCTCCT CCGCCGCATC GTCTAGTACA ACCGCAGGTT CCGTCTCCAG TGAGAGCCAC GCGCGATGGA GATCGGAGAA GCAACAACGG ATCTACTCAG CCAAACTGAT TCAGGCGCTC CAACAAGTCC GCCTCAACTC TTCCGCCGCG ACATCATCAT CTCCAACGGC TCAGAAACGA GGCAAAGCCG TCCGTGAAGC CGCCGATCGA GCTCTCGCCG TTTCCGCTCG TGGAAGAACG CTCTGGAGCA GAGCGATCCT AGCTAATCGG ATCAAACTGA AATTCCGTAA ACAGAAACGG CCGAGAACTA CGACGAAGAT TCCGTCCATG ACCACGGTGG TGAATAGCAG CAACAGATCG AGGAAACGAA GAGTGTCGGT GTTGAGATTG AATAAGAAGA ATATACCGGA TGTTAACCGG AAAGTACGTG TACTAGGCCG GTTAGTTCCC GGTTGTGGGA AACAATCCGT ACCGGTGATT TTAGAAGAAG CAACTGATTA TATTCAGGCT CTGGAGATGC AGGTCAGAGC CATGAACTCT TTAGTTCAGC TTCTCTCCTC CTACGGCTCC GCTCCTCCAC CGATTTGATG AGGTTAAAAT CGTCTTTTAA ATTCTCCCAT CATCATCTCT CTATCTTCTA ATGTGTATAT AGAAGATTCG GTTTGAGTAT AATC 
Length764
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2556748.. 2557545
Download Sequence
A.thaliana
AGI-codeAT3G06590.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summary
Alias[AIF2][ATBS1 Interacting Factor 2]
Gene coexpression
MR
MR Locus Description
9.53939 Ahg475288 pantothenate kinase 1
12.7671 Ahg495325 conserved peptide upstream open reading frame 14
15 Ahg915422 Disease resistance protein (NBS-LRR class) family
21.166 Ahg482750 ARF-GAP domain 7
24 Ahg495375 Tetratricopeptide repeat (TPR)-like superfamily protein
25.4558 Ahg331859
26.3439 Ahg934405 conserved peptide upstream open reading frame 52
28.0891 Ahg485239
28.2489 Ahg481796 Dof-type zinc finger DNA-binding family protein
34.641 Ahg475937 B-box zinc finger family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression