Detail



ID : Ahg478001

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478001|fgenesh2_kg.3__702__AT3G06820.2
Sequence
GCGCCATGGG AACTCTGCTA AATTACAAGT TCAACACATT ATTAATGTAC GATTCGTTCT ACTGCTTTCC CCAGTTTCGT CCGTTAAACT AAAGAGGCAA AATCAAATCG AATTCTCGAA GACGCAAATA ACAACATCTG CATACAGAGT TTAAAGATCT CTTCGGAAGA AGTAATAATG TCTCTGACAT GCGTAAATAT GTCCGAGGAT GTGTGGTTGA CTTGCCTCAC TCACGCATTA TCCACCGAGA CCGAAGAGAT CATGGGTCTC CTTCTCGGCG ACATCGAGTA CTCAAAGAAC GGCGAAAGTG CCACAGCTAT GATCTGGGCA GCATCGCCTC AGTCACGATC TGATCGGCAG AAGGATCGAA TTCATGGTCT TATAATGACG ATATCAACGG GCAGAACTAC ACGGGTGATT GGATGGTACC ACTCCCATCC CCATATTACC GTTCTTCCTT CCCATGTCGA TGTTCGGACA CAAGCTATGT ATCAGCTTTT AGATTCTGGT TTTATTGGCC TCATATTTTC CTGTTTTAGT GAAGATGCTA ACAAGGTTGG TAGAATCCAA GTTATCGCTT TCCAGTCTTC TGATGGAAAC CCGAATAGTA TTCCTAAATC AATGAGCCTG GTTCTTGCTA ATAAAGATTC TGTCATCGAT TTAGAATCGT CATTTAGTTC TTCGGACTCG ATATACCAGA GATCCTCTTC TGCTCGGGGA GACAATCCCG AGCTAGACAC AACTATAGCA TTTTACTCGA GCTTAATGAA AGTTTTGACA AATTATAATT TCTGCATAAT ACAACTCATT ATTCAAATTC TCAAGACAAT CATGGGTGGA GGACGGGTTT CAGATTTTGG GGCTTTCTTT GTTAACAATG CTGAGGCCAA CATCACCGGC AGAGATGGAA CTAGTGGAAA TTACAGCTCA GGCAATCTCA GCAGCACAGC TATAGAAATT GACTCCATGG ACATGTCTGA AAGTATGCAA GAGGCAATGC TCCGTTCAAA TTTAGAAACC AGTGGTGTGG GGTATGTTAG AAAAGAAGTC CCACTTCATG TTTTGCCAAC TTCATCCCTT CTTCAACTCA ATTCACCTTT AGCATCTTTT AAAAGCCTGC AACGAGTACT CTACGAGGAG GAACGAGCAG CGTACCACCA ATCGGTGCAG CAAATCATGA GAGACGGGCG AGTTCATCCT CTTGCTTTCA TTCACAACAC ATCAACATAT CAAGCTTCCA TGTGCAAGTT AATCGAATAC TGCTTGAGTC CTGCCATTAA CGCACTTCAA GATAGGCTGA AGGAGAACAA GATCCGGTTA GCAATGCTGA TGGATGAAGC TGAGGTTTTG GAAGCACAGA AACTTAAAGG AGCAGAGACA AGCGGGGGGC CATCTCGTCT GGTTCACGGT TCTGGCAGCC GAAGCAGAAG AGGACCGTAG AAAGATCTGC GACTAAAAGT CACACGTCCT CTTTGTGTAT GTTTCTATTT GGACATTTGT TTTCTTACAA TTGTATCATT TTGACCAAAC TCCATCGCTT TGTTGTTGTT TAGATTCTGA TCAAGTTTTG GAAGAACCAG AAGAAAAAGA ATGAGAAGAA AATTA 
Length1605
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2667223.. 2669920
Download Sequence
A.thaliana
AGI-codeAT3G06820.2
DescriptionMov34/MPN/PAD-1 family protein
TAIR curator summary
Alias[AtBRCC36B][BRCC36B][BRCA1/BRCA2-containing complex 36 homolog B]
Gene coexpression
MR
MR Locus Description
23.8747 Ahg889656 D111/G-patch domain-containing protein
25.0998 Ahg312397 Plant protein of unknown function (DUF863)
25.4165 Ahg477997 plastid developmental protein DAG, putative
36.0278 Ahg902101 Galactose oxidase/kelch repeat superfamily protein
39.064 Ahg477396 Phosphoglycerate mutase-like family protein
39.6989 Ahg474348
39.724 Ahg898513 UDP-Glycosyltransferase superfamily protein
42.6615 Ahg480644
46.2817 Ahg492869 RNA-binding (RRM/RBD/RNP motifs) family protein
50.3984 Ahg489755 MAPK/ERK kinase kinase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression