Detail



ID : Ahg478179

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478179|fgenesh2_kg.3__880__AT3G08770.1
Sequence
ACAAACACAC CAACAAAAAA AAAACAGAAA GTAACATGAG ATCTCTTTTA CTAGCCGTGT GCCTGGTTCT TGCTTTGCAC TTTGGTGAAG CAGCCGTGTC TTGCAACACG GTGATTGCGG ATCTTTACCC TTGCCTCTCG TACGTGACTC AGGGCGGACC GGTCCCAAGC CTCTGCTGCA ACGGTCTCAC AACACTCAAC AGTCAGGCTC AAACTTCTGC GGACCGTCAG GGCGTCTGTC GTTGCATCAA ATCTGCAATT GGAGGACTTA CTCTCTCTCC TAGCACCATC GACAATGCTT TGTCTTTGCC TTCGAAATGT GGTATTAACC TCCCTTACAA GTTCAGCCCT TCCACCAACT GCGACAGTAT TAAGTGAGGC AAGCAGAAAA TCTTAAAGGA AGCTACTACT ACTACAAGAA CTTTAATAAC CTAATAATAT TGGTTTGCTA GCTAGTTGCA ACGTTGATCA GTGATGTATT GTCATTTCGA ATGTTCTAAT ATAATATCAG CGCAGGCTCT TATCTCTGAA ACATTCTCCA TGCTTCCACC CTACACACAT AT 
Length562
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3254275.. 3254933
Download Sequence
A.thaliana
AGI-codeAT3G08770.2
Descriptionlipid transfer protein 6
TAIR curator summaryPredicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.
Alias[LTP6][lipid transfer protein 6]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg945123 Putative membrane lipoprotein
4.58258 Ahg488983 Plant invertase/pectin methylesterase inhibitor superfamily protein
4.69042 Ahg471298 cytochrome P450, family 77, subfamily B, polypeptide 1
4.79583 Ahg942456 SSXT family protein
5.65685 Ahg921327 Heavy metal transport/detoxification superfamily protein
6.32456 Ahg494222 Pectin lyase-like superfamily protein
8.3666 Ahg942985 Papain family cysteine protease
8.7178 Ahg946508
8.94427 Ahg323748 serine carboxypeptidase-like 36
9.48683 Ahg490341 glycosyl hydrolase 9B13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression