Detail



ID : Ahg478281

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478281|fgenesh2_kg.3__982__AT3G09600.1
Sequence
ATCTGAAACA TAACCGATGA GCTCGTCGCC GTCAAGGAAT CCGACGAACG CCGAAGTACC TCCGCCACCA CCAACATCGA CGGATGCGGT GGCAGAGGGT TCGTCTAAGA AAGTGAGGAA ACCTTATACC ATCACCAAGT CTAGGGAAAG CTGGACAGAG GAAGAGCATG ATAAGTTTCT TGAAGCACTT CAACTGTTTG ATCGAGACTG GAAGAAGATT GAAGATTTTG TTGGTTCAAA GACTGTGATT CAGATAAGGA GTCACGCCCA AAAATACTTT CTAAAGGTTC AGAAAAACGG GACATTAGCA CATGTGCCAC CTCCTCGGCC TAAGCGCAAA GCAGCTCATC CGTATCCTCA AAAGGCATCG AAGAACGCTC AAATGCCACT TCAAGTTTCC ACGTCTTTTA CTACTTCGCG AAATAGCGAC ATGCCGGGAT TTGCTTCATG GGATGATGCC TCAATGCTGC TAAACAGAGT TATTTCACCA CAACATGAAC TTGCTACTCT TCGTGGAGCA GAAGCTGATA TTGGATCAAA GGGCTTATTA AATGTTAGTA GCCCTTCTAC ATCTTGTATG GGAAGCTCAA GCCGAACAGT ATCAGGTTCT GAGATTGTAA AAAAGGCGAA ACAGCTTCCC GTTCTTCACG GTGTTCCTGA TTTTGCTGAA GTTTATAACT TCATTGGGAG TGTCTTTGAT CCTGAAACGA GAGGCCACGT GGAAAAGCTC AAGGAAATGG ATCCTATAAA TTTTGAAACT GTTCTGTTAT TGATGAGAAA CCTCACAGTT AACTTATCAA ACCCTGATTT AGAATCCGCT AGGAAAGTCC TCTCATCATA TGCCGTGAAG ACCGAGCTCC CAAGCGTTGT TTCCCTTGTC AAGAACTCAA CAAGCGACAA ATCAGCTTAA CAAAAATATC AGCCATTAGC TATCAAGTTT ACTCATCGGT TTTCCATGTT TAATAAACTT TGGTGTTATA CGTCACTGGG AATCACAATC TTGTCAATGC ATCATCATGT GGGAATTGTG TAAAAGGTCT TTGTTGTTTT GAGGAGAAAC GTAAGCCAAG TTTTCGAGCT ATAGGGGACT TCCGCAGATT TTGACCAGGA CTAGTTGGGT GAATGGTAGG TATAATATAT GTAAGGGGTT TTCTACTAGT TGCTAGACAG CCTCTTTCTC ATCCGCCGGT TACTCTTGTA CAAACATCTC TTCATATTTT TTGTTCAGTT GTTGTGTATG TGTCAAGGAT TAAATCCTAG GACTGATTGT AATGGTTCAA GATCAGTGTT AAGTTATATA ACGGCAACTC TAATTGTTTT GAAGTTGACA GCTTTCTCTA T 
Length1341
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3579561.. 3582064
Download Sequence
A.thaliana
AGI-codeAT3G09600.1
DescriptionHomeodomain-like superfamily protein
TAIR curator summary
Alias[LCL5][RVE8][LHY-CCA1-LIKE5][REVEILLE 8]
Gene coexpression
MR
MR Locus Description
7.74597 Ahg935667 circadian clock associated 1
10.7703 Ahg494217 tonoplast dicarboxylate transporter
11.6619 Ahg926720 alpha/beta-Hydrolases superfamily protein
14.8997 Ahg474897 Glutaredoxin family protein
21.5407 Ahg932186 myo-inositol-1-phosphate synthase 2
22.4499 Ahg904747 Protein of unknown function (DUF760)
22.5832 Ahg479955 Serinc-domain containing serine and sphingolipid biosynthesis protein
23.6854 Ahg485852
24.4949 Ahg481640 Cysteine proteinases superfamily protein
26.3818 Ahg488595 Homeodomain-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression