Detail



ID : Ahg478407

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478407|fgenesh2_kg.3__1108__AT3G10720.2
Sequence
ATGCAAAGAC TAAACTTCTC TTCTTCACTC TTATTCCTGT CTTTTTTCTT CTTCTCATGG GCTTTGCTAA TCTCATCACA ACAATCTCCG TCACAGCCAC CTTCTGACCC TCCGTCACCG TTACCTTTTG AGCCTCCGTC GCAGCTACCT TTTGAGCCTC CGGTAGAGTC ACCATTCTTG CCTCCGTCAC AGCCACCAAT ATTCGTGCCA CCGTCACACC CACCTTCTTT GCCTCCGTCA CAGTCTCAGT CACCTTCTCT CGCTTGTAAG TCAACTCCAT ACCCTAAGCT CTGCCGTACG ATCCTTAACG CTGTTAAATC CTCACCGTCC GATCCTTACC GTTACGGCAA ATTCACGATA AAGCAATGCC TCAAACAAGC AAGCCGTCTC TCCAAAGTCA TCACCAGTTA CGCGCTCCGC GTGAAAAGCA AACCAGGCTC CGCCACGGCC GAGGAAATCG GCGCTCTAGC GGACTGCGGC GAGTTATCGG AGCTGAGTGT GAACTACCTT GAAATGGTCA CGACGGAGCT CAAAACGGCG CAGGTGATGA CGGCAGCTCT AGTCGAGCAT GTGAACAGTC TTCTCAGTGG CGTGGTGACG AATCAGCAGA CGTGTCTTGA CGGACTCGCG GAGGCGAAGA GTGGATTCGC CGCCGCGATT GGGTCGCCGA TGGGGAATCT CACGCGACTT TACAGTATCT CGTTGGGGCT TGTGAGCCAC GCGCTTAATC GTAACCTAAA GAGGTATAAA GCTGCTAAAG GGAAGATTCT TGGTGGTGCG AACTCAACAT ATCGCGAACC GCTCGAGACT TTAATTAAGG GTTTACGTAA AACATGCGAC AACGACAAAG ATTGTCGGAA AGCTAGCCGG AACTTAGGGG AGCTAGGTGA GACGAGCGGT GGTTCCATCC TCGTGAGTAA AGCAGTGATC GTCGGCCCGT ACAAATCCGA CAACTTCACA ACCATCACCG ATGCTATTGC AGCCGCACCT AATAACACTA GACCAGAGGA TGGTTACTTT GTCATCTACG CAAGAGAAGG TGTCTATGAA GAATATATTG TTGTTCCCAT CAACAAAAAG AACTTAATGC TTATTGGAGA TGGGATCAAT AAGACGATTA TTACTGGGAA CCATAACGTT GTTGATGGTT GGACAACGTA TAATTGCTCG AGCTTTGCTG TGGTTGGAGA GCGGTTCATG GCGGTTGATG TTACATTCAG AAACACAGCC GGACCTGAAA AACATCAGGC TGTGGCTTTG AGGAACAATG CAGAAGGATC GAGTTTTTAT CGGTGTAGTT TTGAAGGCTA TCAAGATACT CTCTACGTCC ATTCTCTCAG ACAATTCTAT CGTGAATGCG ATATATATGG TACCGTCGAT TTTATATTCG GAAATGCAGC CGCAATTTTC CAAAATTGCA ACATATATGC TCGAAAACCA ATGGCCAAGC AAAAGAACGC GATAACTGCT CATGGAAGAC TCGATCCAAA CCAGAATACC GGAATCTCTA TCATCAATTG TACAATAAAA GCCGCCCCAG ATCTTGCAGC CGAGCCTAAA TCAGCCATGA CATTCTTAGG GAGACCATGG AAGCCCTACT CAAGGACGGT TTTCATGCAA TCATATATTA GTGACATTGT CCAACCAGTT GGATGGCTGG AATGGAACGG TACAACTGGA CTAGACACAA TCTACTACGG TGAGTACGAT AACTTTGGAC CAGGGGCTAA CACGAACCAG AGAGTGCAGT GGTTAGGGTA TAATTTATTG AACTTGGCAG AAGCCATGAA CTTCACGGTC TACAACTTCA CCATGGGAGA TACATGGTTG CCTCAAACCG ATATTCCTTT CTATGGTGGT TTGCTTCGCA AAGAATGA 
Length1878
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4042465.. 4045292
Download Sequence
A.thaliana
AGI-codeAT3G10720.2
DescriptionPlant invertase/pectin methylesterase inhibitor superfamily
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
18.9737 Ahg333105 3-ketoacyl-CoA synthase 20
22.8473 Ahg931491 Pollen Ole e 1 allergen and extensin family protein
25.3969 Ahg485020 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
42.7551 Ahg314697 pectin methylesterase 1
42.8486 Ahg471076 Eukaryotic aspartyl protease family protein
43.2319 Ahg492486 Pectin lyase-like superfamily protein
54.3139 Ahg893513
58.9661 Ahg471014 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
72.8286 Ahg470362 FASCICLIN-like arabinoogalactan 9
76.0132 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression