Detail



ID : Ahg478408

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478408|fgenesh2_kg.3__1109__AT3G10730.1
Sequence
AAGATCATGT CGGCATCAAC GGTGTCAATC ACCGCTAGTC CTACGAGGGC AATTAGGCGG ACGCCGGTTC TCTCCGGTGA GAATAAATCC AATTTTGATT TCCCGCCGAG CGAATCTCAT GCCAATGCGG CAATTGGAGA GTCTTCCGCT GGTACGAACA AGGATCTGAT TCGCTCCGAG GCTGCCGCTG AGAGATCTAA CACCTACGAC GTCGGTCCTG TGACTAGGAA ATCGGGATCC ACCGCGACGG GGACTAATAC AACCACCACG CAGCGTCGAA CGCGGAAGTC TCAGGGGAAT AAGACAGATA AGGGGCAGTG GAAGACAGTG GTTAGGGTAT TCGCGAAGCA ATTTGGGGCT CTTTTGTTAC TTGTTGGGTT GATTCAATTG ATTAGGAAAT TGACTTTGAA GGATTCGTCT CTATCTTCTT CGAATTTCCC AATTGAAACG GAAATGGTGC TTTCGGAATT GGAGAGTCGG ATTTCGGCTG TTGATGGTTT GGTAAAGACT ACTACGAAGA TGATGCAGGT TCAAGTTGAA TTTCTTGATA AGAAGATGGA AAGCGAATCA AGAGCATTGA GGCAGACGAT AGATTCCACA TCTTCTGCGT TGCAGAGTGG GTTGAAGAAG GTAGAGTCTA AGACGGAGAG ATTGCAGGTT TCCGTAGATG AGTTAAATGC TAAACCTTTG GTGTCTAGAG AGGAATTAGA GAGAGTTTAC GAGGAGTTGA AGAAGGGTAA GGCCGGTGAT TCTGCTGTTA ACATTGATGA ATTGAGGGCT TATGCTCGTG ACGTAGTGGA GAAAGAGATT GGAAAGCATG CTGCTGATGG CCTTGGGCGA GTAGACTATG CGTTAGCGTC TGGTGGGGCT TTTGTAATGG GGCATTCGGA TCCGTTTCTT GTTGGAAATG GGGGTATTTG GTTTGGGACA AGCAGGCGGC GGGTTCATAG CAAAGCGGTT AAGATGTTAA CTCCGAGTTT CGGGGAGCCT GGACAGTGTT TTCCTCTGAA AGGAAGCAAT GGCTATGTTC TAGTCAGGCT AAGAGCACCA ATAATTCCAG AGGCCGTTAC CTTGGAGCAT GTCTCTGAGG CTGTAGCGTA TGACAGATCG AGCGCCCCAA AGGATTGCCG GGTATCAGGA TGGCTAGGTG ACATAGATAT GGAGACTGAA ACCATGCCCA TTCTTACAGA ATTCAGTTAC GACTTAGACA GGTCCAATGC ACAGACATTC GACATTGCAG AGTCTGCTCA TTCGGGACTT GTCAACACTG TCAGGCTAGA CTTCAATTCC AACCATGGAA GCTCTTCACA CACTTGCATC TACCGCTTCA GGGTTCATGG CTGTCAACTA GACTCAGTCT CTGTTGTTCA TGCTTGATCT GAAGTCCACG TGAAACTTTT CTTCTATTTG TAACATCTTT TTTTTTGTTA GTTTGTGTGG TGGGAAAGCT TCTAGTCTGT AATCAGAATC ATTTGGTTGT ATTCGTGCTT ATTATTTTTC AAATCTGTTT TGGTTAGGGT ATGTATCCTC CGATTTGAA 
Length1539
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4046115.. 4048290
Download Sequence
A.thaliana
AGI-codeAT3G10730.1
DescriptionSAD1/UNC-84 domain protein 2
TAIR curator summaryEncodes a member of the Sad1/UNC-84 (SUN)-domain proteins: AtSUN1(At5g04990), AtSUN2(AT3G10730). SUN domain proteins are part of the cytoskeletal-nucleoskeletal bridging complexes. AtSUN1 and AtSUN2 are localized to the nuclear envelope and are present as homomers and heteromers in vivo.
Alias[ATSUN2][SUN2][ARABIDOPSIS SAD1/UNC-84 DOMAIN PROTEIN 2][SAD1/UNC-84 domain protein 2]
Gene coexpression
MR
MR Locus Description
9.79796 Ahg949223
15.4919 Ahg497488 eukaryotic translation initiation factor 2
26.9815 Ahg905007
37.7492 Ahg929548 Peroxidase family protein
39.9124 Ahg349820 Mad3/BUB1 homology region 1
44 Ahg897234
52.915 Ahg483672 Pentatricopeptide repeat (PPR) superfamily protein
64.3195 Ahg940923 GDSL-like Lipase/Acylhydrolase superfamily protein
69.4118 Ahg936528 Transducin/WD40 repeat-like superfamily protein
78.7083 Ahg938693 Glycosyl transferase family 4 protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression