Detail



ID : Ahg478481

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478481|fgenesh2_kg.3__1182__AT3G11440.1
Sequence
ACTTGGATCT CTTTCTCTAT CTCTCTCCAT TTTCTGAGAT ATCTTCGCTC GAGCTTTCCC GCGTTATCTC TCTCCCTCTC CTGGTGGGAG CTTGATGTCT AAATTGTTCT TGAAGTGCTG GAGTCTGTGT TGCGTTAAGT AGAAATAGAT GAGTTACACA ACAACCACGG TTGATAGTGA TGATGGTATG CACTCCAGCA TCCATAATGA ATCACCAGCT GCTGATAGTA TTGGCAATGG CTGCAGAAGT AGAGGGAAAA GCCGTGTCCT GAAGAAAGGA CCATGGACAT CAACTGAAGA TGGGATTTTA ATTGATTATG TAAAGAAGCA TGGCGAGGGT AACTGGAATG CTGTGCAGAA ACACACGAGC CTGGCCCGGT GTGGTAAAAG CTGTCGTCTG AGATGGGCTA ATCATCTGAG GCCAAACTTG AAGAAAGGAG CATTTAGCCA AGAAGAAGAA CAGCTCATTG TTGAAATGCA CGCCAAGATG GGAAATAAAT GGGCACAGAT GGCTGAACAT TTACCTGGTC GAACAGATAA TGAGATAAAG AATTATTGGA ACACTCGTAT CAAGAGGAGA CAACGTGCAG GCTTACCACT TTACCCTCCT GAAATCCATG TTGAAGACTT TCAGTGGAGC GAAGAGTATA CAAAGAGTAA TATCATAAGA GTAGATAGAA GAAGACATCA AGATTTCTTG CAGTTGGGGA ATTCCAAAGC TAATGTCTTA TTTGATGATC TAAATTTTGC TGCTAGCTTG TTACCTGCCG CTTCTGACCT ATCAGATTTG GTTGCATGCA ACATGCTAGG AACTGGCCCA AGTTCTTCTC GGTATGAAAG CTACATGCCA CCAATATTGC CTTCCCCAAA GCAAATCTGG GAATCTGGAT CTCGGTTTCC TATGTGCAGC AGTAACATAA AGCATGAATT CCAATATCCG GAACACTTTC AGAATACTGC TTCACAGAAG AATCCCAGAT CTTGCAGTAT CTCGCCTTGT GATGTTGATC ATCCTCCTTA CGGAAACCAA CATTTATCTG ATATGATGAT TCCAGATAGC CATACCGTTA TGTATGGCAT GCTTCCTACT TCTAAGCCCT CGTTTGGGGC AGTGAAGCTG GAGCTCCCTT CATTCCAATA TTCAGAAACT AGTGCATTTG ATCAGTGGAA GACGACACCG TCACCTCCAC ACTCAGATCT CCTTGACTCT GTTGATGCCT ATATTCAATC TCCACCATCA TCGCAGGTAG AGGAGTCAGA TTGTTTCTCT TCATGCGACA CCGGCCTACT AGATATGTTA CTTCATGAGG CCAAGATCAA AACTAGTGCG AAGCACAGTT TGTTGATGTC ATCACCCAAG AAGAGTTTCA GTTCAACTAC TTGCACGACC AATGTTACTC AGAATGTACC ACGTGGCGGC ACCCTGATCA AATCAGGTGA ATATGAAGAT TCCCAAAAGA ATTTGACTCG CTCCGAGATT ACAATGCCCA TGCAACTTAG CGCAGGTGGA ATTTCATCAG CTTTTGCAGG GAATGTTGTA AAGACAGAAG AGTTTGATCA GGTTTGGGAA CCAAAGAGAG TTGATACTAC ACGGCCTGAT GTTTTACTTG CGTCGAGCTG GCTTGACCAA GGCTGTTTTG GGATTGTTAG AGACACAAGC AGCATGAGCG ATGCGCTTGC GCTTCTTCTT GGTGGTGACG ACACTGGGAA CAGTTACGTG ACTGTTGGGT CATCATCAGG TCAAACACCA CGAGGCGTTG GGTCATGTGG ATGGACTAAT ATGCCTCCTG TTTGGTCGTT GTAACGAAAT GAACCATATC ACACTTTGAA TCTTTCTGTA TTTTCATGAA ACTGGCTTAC ATGACTTGCG GTTTGTTATA GTTGAGAGAA GATTTATGGA CTTGGTAAAA AAATTGGATT TTCTTCACCT GATGCATTTA TATATACCAA TTTCTTGTT 
Length1959
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4324545.. 4327538
Download Sequence
A.thaliana
AGI-codeAT3G11440.1
Descriptionmyb domain protein 65
TAIR curator summaryMember of the R2R3-MYB gene family. Similar to GA-induced Barley myb gene. May be induced during germination in response to GA. Double mutants with MYB33 are male sterile, showing defects in pollen development and anther development. Contains a binding site for miRNA159 and may be spatially regulated by this micro RNA. The male sterile phenotype of the MYB33/MYB65 double mutant is light and temperature sensitive. Fertility can be restored with increased light intensity and lower temperatures.
Alias[ATMYB65][MYB65][MYB DOMAIN PROTEIN 65][myb domain protein 65]
Gene coexpression
MR
MR Locus Description
24.1868 Ahg482883 AMMECR1 family
48.0625 Ahg482949
54.1572 Ahg496302 NAC domain containing protein 100
62.2736 Ahg482594
90.5538 Ahg496205 RING/U-box superfamily protein
95.3415 Ahg493277 RNI-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression