Detail



ID : Ahg478510

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478510|fgenesh2_kg.3__1211__AT3G11650.1
Sequence
AATTTCTCTC TGAGGCAATT CGTCGAACAC ATGGGGACCA AACAACCATA CCTAAACGGC GCATACTACG GACCATCGAT TCCTCCGCCG GCTAAAGCTC ACCGCAGCTA TGACTCACCT GGATTCGGAT GCTGTTGCTT CAGCTGCCTC GGAAGCTGTC TACGCTGCTG CGGTTGCTGC ATCTTAAGCC TGATCTGCAA CATCCTCATA GCCATAGCCG TAATCCTCGC AATCACCGGT TTTATCCTCT GGCTCATATT CCGTCCAAAC GCCGTCAAAT TCTACGTCGC CGACGCTAAT CTGAACCGAT TCAGCTTCGA TTCAAACAAC AACAGCAATC TCCATTACAG TCTCGATCTC AATTTCACAA TCCGTAACCC TAATCAACGA GTCGGAGTCT ACTACGATGA GATCTCGGTG AGTGGCTATT ACGGTGATCA GAGATTCGGA TCTGTGAACG TATCGTCGTT TTATCAAGGG CATAAGAATA CGACGGTGAT TTTAACAAAA ATTGAAGGAC AGAATCTGGT GGTGCTCGGC GACGGAGCGA GAACAGATCT GAAGGAAGAT GAGAAATCTG GGGTTTATCG GATTGATGCG AAATTGCGGC TAAGTGTTCG GTTTAAGTTT TGGGTGATTA AGTCGTGGAA GCTTAAACCA AAGATTAAGT GTGATGATCT TAAGATTCCT CTTGGTTCCT CTAATTCAAC CGGAGGGTTT AAGTTTCAAC CAGTCAAGTG TGATTTTGAC TTATCTTAGT CAACTCCAAG TTTTATGATT TTTTTTTT 
Length788
Protein Sequence
Protein Residue
Map Locationscaffold_222: 1746.. 2520
Download Sequence
A.thaliana
AGI-codeAT3G11650.1
DescriptionNDR1/HIN1-like 2
TAIR curator summaryEncodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus and spermine. Overexpression of the gene induces the expression of PR-1 gene and shows light-dependent 'speck disease-like' symptom on leaves. The gene product is localized to the chloroplast
Alias[NHL2][NDR1/HIN1-like 2]
Gene coexpression
MR
MR Locus Description
1 Ahg497322 NDR1/HIN1-like 2
33.0454 Virus1719
69.5773 Virus1889
76.4068 Ahg950185 ATPase, V0 complex, subunit E
90.598 Ahg347509 Leucine-rich repeat (LRR) family protein
93.5521 Ahg315354 Nucleoporin autopeptidase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression