Detail



ID : Ahg478519

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478519|fgenesh2_kg.3__1220__AT3G11730.1
Sequence
AAATCTCGGA AACGCAGTCT TCAGCTTCAG CTAAATCATG AGCAACGAGT ACGATTATCT GTTCAAGCTT TTGTTGATCG GTGACTCCTC TGTTGGAAAA TCATGCCTTC TTCTTCGATT CGCTGATGAT GCTTACATTG ACAGCTACAT AAGCACCATT GGTGTTGACT TCAAAATTAG AACGATTGAG CAGGATGGGA AGACGATTAA GCTGCAAATT TGGGATACTG CTGGACAGGA GCGTTTCAGG ACCATCACTA GCAGCTACTA CAGAGGAGCT CATGGGATCA TTATTGTGTA TGATTGTACT GAGATGGAAA GCTTCAACAA TGTGAAGCAG TGGTTGAGTG AGATCGATAG ATATGCTAAT GAGAGTGTAT GCAAGCTTCT AATCGGTAAC AAGAATGATA TGGTTGAAAA TAAAGTTGTT TCCACTGAAA CTGGAAAGGC CTTAGCAGAT GAGCTAGGAA TTCCCTTTCT TGAGACCAGT GCCAAGGATT CTATCAACGT CGAACAAGCA TTCTTAACTA TTGCCGGCGA GATCAAGAAG AAAATGGGAA GCCAAACGAA TGCAAACAAG ACATCTGGTC CTGGAACTGT TCAAATGAAA GGTCAGCCAA TCCAACAGAA CAATGGCGGT TGCTGCGGTC AGTAGTTTAA AAAATGTTAT ATCAAAACTA TCTGAGACTC TCTTTCTTTT TTTTTCCCTT TTTAACTGTG TTGTGAAAAC AAATGACTGA ACTTAGAACT GTAATATTTC ATGTCACTGT GGCTTGAATA AGCTATGGTG TTAGTTGCAA GATCCTTGTC TTT 
Length813
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4439005.. 4441159
Download Sequence
A.thaliana
AGI-codeAT3G11730.1
DescriptionRas-related small GTP-binding family protein
TAIR curator summaryEncodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. It has also been identified as an isoprenylated protein.
Alias[ATFP8][ATRABD1][RABD1][ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG D1][RAB GTPASE HOMOLOG D1]
Gene coexpression
MR
MR Locus Description
1 Ahg925912 alpha/beta-Hydrolases superfamily protein
6.48074 Ahg496673 histone acetyltransferase of the MYST family 1
15.4919 Ahg356397
15.8745 Ahg914728 CBS domain-containing protein / transporter associated domain-containing protein
21.0713 Ahg482806 chaperone protein dnaJ-related
23.6854 Ahg895753 HSP20-like chaperones superfamily protein
30.9839 Ahg946588 histidine triad nucleotide-binding 4
31.4643 Ahg478976 Plasma-membrane choline transporter family protein
33.9853 Ahg476066 homologue of bacterial MinE 1
34.9571 Ahg496782
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression