Detail


ID : Ahg478727

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478727|fgenesh2_kg.3__1428__AT3G13445.1
Sequence
CCCAAATCCG AGACGCAAGT CGGTGACCTC CTTCTCACAG ATCTAAAAAC CAGAAACGAG AGAACAAATT CACTCTCTCC CTTATATAAG CACCGATTTA TAAATCTTTT TCCCTCTCCG ATTCTCAATT CTTTGTATAA AAAGCTTCTC CTTTTCTCAA TTCTTCGGCT TCCTTTCGCC AAATTCTTCC CGCGAATCTT CCCTAATCGT CTTAAAGCTA CGAAACCCTA GATTTCGGAT TTCCTCGCTA TCCAAAGAAT AATGGCTGAT CAAGGATTGG AAGGGAGTAC TCCAGTGGAC CTTAGCAAGC ATCCTTCAGG GATTGTTCCT ACTCTTCAAA ACATTGTCTC CACGGTGAAC CTAGACTGCA AGCTAGATCT TAAAGCCATA GCTTTGCAGG CTCGGAATGC TGAATATAAT CCCAAGCGTT TTGCTGCTGT TATTATGAGG ATCAGAGAAC CGAAGACTAC AGCATTGATA TTCGCCTCAG GGAAAATGGT CTGTACTGGA GCGAAGAGTG AGTACTTTTC GAAGATGGCT GCCCGAAAGT ATGCTAGGAT TGTGCAGAAA TTGGGATTCT CTGCAAAATT CAAGGATTTC AAGATTCAGA ATATCGTAGG TTCTTGTGAT GTCAAATTCC CTATAAGACT TGAAGGTCTT GCTTACTCTC ACGCTGCTTT CTCAAGTTAT GAGCCCGAGC TCTTCCCAGG GCTGATTTAT AGGATGAAAG TGCCTAAAAT CGTCCTTCTA ATCTTTGTCT CTGGGAAGAT CGTTATAACA GGAGCCAAGA TGAGAGAGGA GACCTACAGA GCCTTTGAGA ATATATACCC CGTGCTCACG GAATTCAGAA AGATACAGCA ATAGGGTCAA GGATTTGTTC CCTGCAGAAC TAGTTGTGCG GTCTTAGCCC CTTGGAGTTG CTAAAGCTTG CTGAGAATTT TGCCCTTGAA CAAGGGCTTT CACAGTAGCT AGACTCTCAC CTTGTGTTTT GGTTCATAAT ATAACATTGT ATATACACAA TGGAGATTCC AAAGACAATT CTTCGGTTCT TTTTCTCTTT TCCAAGATAT GTCTTACATG TACGATTTTG TAGTATCCTT AGAGCATGAT TAACAATAGT ATCTTAAAAA TAGTTCTTAG AATATGTTAA AAGTCTTGTT TAGCATAGAT TAGCCAATTA GCCAAGATTA TGAACAAAGA TGGAGAGTTT CAAGATC
Length1217
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5175409.. 5178018
Download Sequence
A.thaliana
AGI-codeAT3G13445.1
DescriptionTATA binding protein 1
TAIR curator summaryTBP (TATA binding protein) associates with TAF(II)s (TBP-associated factors) to form the TFIID general transcription factor complex
Alias[TBP1][TFIID-1][TATA binding protein 1][TRANSCRIPTION FACTOR IID-1]
Gene coexpression
MR
MR Locus Description
9.8995 Ahg492258 PPPDE putative thiol peptidase family protein
14.4914 Ahg497403 HR-like lesion-inducing protein-related
14.4914 Ahg924398 emp24/gp25L/p24 family/GOLD family protein
24.2899 Ahg898832 Integrin-linked protein kinase family
28.3725 Ahg480394 Reticulon family protein
31.8748 Ahg471648 basic pentacysteine 2
33.6749 Ahg492344 SUMO-activating enzyme 1A
42.9884 Ahg472532 Protein kinase family protein with ARM repeat domain
44.6654 Ahg480516 proteasome family protein
46.2817 Ahg482359 Alba DNA/RNA-binding protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression