Detail



ID : Ahg478877

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478877|fgenesh2_kg.3__1578__AT3G14590.1
Sequence
GTCTCTGAAC TAACTAATCA ATTGTTTCTT TGGTCTTTTC TAACTAACAC ACATGAAGGA CTCGATTCGG ATGGTTTGGT TTCATGAGAT TGGTGTTTGA TCCCTCGGAT TTAAGAAAAA GCGAGAAACT TTGGACTAGT TAAGTTGTTC ATTTCTGGGT TTTGTAACGG AGGACGTAAA ATAATGGAGT GTTCGGTAAT CCATCATGTG GTGATTGTGT TACTGTTCCT TTGGGTTCTA TCTTACTTGA ATCGATCACA CGCTCTTTTC TATTTCCTCT CGCTGGTTTA TCTTTACCTG GTATGTTATT CCTTCTCTGG AGACATGTTT CTTTTAGGTG TTAAAGCCTC AAATTTATCG GATTTGGTGC AAAATATTGT GTTGGTGGGT TTCTTTTAGG TTCATGAACG CTATGTGATG AGGTTGAGGA AGAAACTACA GTTTGAAGAG AGGAAGCAAG CTAACCAGAG AAGGGTTCTA TCTGATTCTG AATCGGTGAG GTGGTTAAAT CATGCTATGG AGAAGATATG GCCTATTTGT ATGGAACAGA TTGCATCTCA GAAGATTCTA CGTCCGATCA TACCTTGGTT CTTGGACAAG TATAGACCTT GGACTGCGAA AAAAGCTGTG ATACAACACC TCTATTTGGG AAGAAACCCG CCTTTGTTGA CAGATATAAG GGTGCTTCGG CAATCTACGG GTGATGATCA CTTGGTGCTG GAACTTGGAA TGAATTTCCT CACAGCAGAT GATATGAGCG CAATACTCGC TGTGAAGTTA AGAAAAAGAC TTGGGTTTGG AATGTGGACA AAGTTGCATT TGACAGGAAT GCATGTTGAA GGAAAGGTGT TGATTGGAGT GAAGTTCCTT CGTCGATGGC CTTTTCTGGG GCGTTTACGT GTTTGTTTTG CAGAGCCACC TTATTTCCAA ATGACTGTTA AACCAATTAC CACTCATGGA CTTGATGTTG CTGCGCTTCC AGGAATTGCA GGATGGCTAG ATAAACTTTT GTCTGTCGCA TTTGAGCAAA CTCTTGTTGA GCCAAATATG CTGGTAGTTG ATATGGAGAA ATTTGTTAGC CCAGAGCCAG GAGAAAATTG GTTCTTTGTT GATGAGAAAG AACCAGTAGC ACACGCTCTT GTTGAAGTCG TTGAAGCATC TGATGTTAAA CCATCAGATC TAAACGGTTT AGCTGATCCA TATGTGAAAG GGCAGCTTGG CGCTTACAGA TTCAAAACCA AGATACTATG GAAAACGTTG GCTCCTAAAT GGCAAGAAGA GTTCAAGATA CCAATTTGCA CATGGGACTC CCCAAATATC CTTAACATTG AAGTTCAAGA CAAAGACCGA TTTACCGATG ACAGTCTTGG CGATTGTTCA GTGAACATTG CAGAGTTTCG AGGCGGCCAA AGAAATGATA TGTGGTTGCC TCTTCAGAAC ATTAAAATGG GGAGGCTGCA CCTTGCTATA ACCATACTTG AGGACGAGGC AAAGTTGAAC GATGATCCGT TTGAAGGAGT GACAATAAGT AAGGAAGACA TGTGGGCTTC TTTTGCTTCC GACGTTACAA GTAAAGGTTC CTTCTCATCA GTGGTATCTG ACAAGTCTCC AAGGGTTCCT GATAATATGG AACCAATTAA CATCGAAGGA CAAGAAGAGA CTGGAATCTG GGTACATCAA CCAGGAACTG AAGTCTCACA GATTTGGGAA CCAAGAAAAG GCAAGAGTCG ATGCCTTGAT AACGAAATAC GTGGTGCTGG CAGTGTCCGT TCCACTGCAT CTACGTCGCC CAACAAAGAA AGCAGCAGCA CTGATGAAAA TCAGGAAGGG AAGAGCACGA TGAAGTCTGT TGGTCGGGGA TTGAAGAAAA TCGGTTTAGT GTTCCATAAG AATGGAAAAA AGGAAGAATG TCATCATAAA GGGAACATTG AAGAGGATAT CAGGTCTCCT CGGATTAATT TGAAGGCGTT AAATCAAAAG GATGTTGGGG TTAAGTTCAT CGTTGAAGAC AGGCTATCGG GGCCTCTCAC AGGAAGAAGT CCAAAAGGTG AGAGCTTTGG TTCTGAAGAC AGTCAGCACA AGGGACACAT GAAGGATGTT GCAAAGAGCA TTCTAAAACA TGCTGAAAAG TCTGCAAGAC ACCTTAAGCA TGCTTTTTCG CGTAAAGGAT CAAGGAAATC AAGAGATGAC GAGTGTTCAA CTGTGTCAGA GCAAGACTCT GAATGTCAAC GTGAAAATTC TGATGATGAA TCTGTATTTA GCAGTGTGCA GGACCTGGGA ACACCAAGAA CAGCAAAACT TGAAGGAAAA ACTGTCAGGG GAGGTGAAGA TGATAATGTA AATACATCAG CAAACTCCAA AGACGATTCG AAAGCAGACA TTTCGAAAAA CAAAGAAACA AAGATAAATT TAGCAAACTT GGAAACTACA TATAGTGATG CCAGGAACTC TTTTGCTGGA GCCAAGAAAG TCACCACCCC CAAGAGTCGA AGGATTGAAA AGGAATCATA GGTAAATAAC CACAAGCTTG AGGATGAAAT TTTGATTAGC TTAGCTGTAG ATGTACGCCA AAGGATTCTT GTACAGCTTT TTAGTTTCGA GTCTTTGTCT TGCTT 
Length2615
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5797802.. 5801411
Download Sequence
A.thaliana
AGI-codeAT3G14590.2
DescriptionCalcium-dependent lipid-binding (CaLB domain) family protein
TAIR curator summary
Alias[NTMC2T6.2][NTMC2TYPE6.2]
Gene coexpression
MR
MR Locus Description
27.7849 Ahg484384 cytochrome P450, family 71, subfamily B, polypeptide 19
30.3974 Ahg477666 NAC domain containing protein 47
43.4051 Ahg950508 temperature-induced lipocalin
48 Ahg487625 diacylglycerol kinase1
50.05 Ahg483895 myb domain protein 2
56.2139 Ahg490342 sucrose synthase 3
57.0964 Ahg942923 UDP-D-glucose/UDP-D-galactose 4-epimerase 5
59.3296 Ahg340560 O-Glycosyl hydrolases family 17 protein
68.5347 Ahg931273 UDP-glucosyl transferase 73B5
72.374 Ahg470152
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression