Detail



ID : Ahg478920

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478920|fgenesh2_kg.3__1621__AT3G13610.1
Sequence
ACAACACAAT CAAAATCCAA AAGTCTCAAT CTTTTCCAAT GGCTCCAACA CTCTCAACAA CCCAATTCTC AAACCCAGCT GAAGTAACCG ACTTCGTAGT TCACAAAGGA AATGGTGTAA AGGGTTTATC AGAAACTGGA ATCAAAGCTC TTCCAGATCA ATACATCCAG CCACTTGAAG AACGACTCAT CAACAAATTC GTCAACGAAA CAGATGAAGC CATTCCGGTG ATCGATATGT CGAGCCCTGA CGAGAACAGA GTCGCTGAAG CTGTCTGTGA TGCTGCTGAG AAATGGGGTT TCTTTCAAGT TATCAATCAT GGAGTCCCTT TGGAAGTTCT TGACGACGTG AAGGCTGCGA CTCACAGATT CTTCAATCTC CCTGTTGAAG AGAAGTGCAA ATTCACTAAA GAGAATTCTC TGTCGACGAA TGTTAGGTTT GGGACGAGTT TTAGTCCCCT TGCAGAGAAA TCTCTCGAGT GGAAAGATTA TCTCAGTCTC TTCTTTGTCT CTGAAGCTGA AGCTGAACAG TTCTGGCCTG ATATCTGCAG GAATGAAACA TTAGAGTACA TGAACAAGTC AAAGAAGATG GTGAGGAAGC TTCTAGAGTA TTTGGGGAAG AATCTCAATG TTAAAGAGCT CGACGAGACG AAAGAATCAC TCTTTATGGG TTCGATTCGA GTCAACCTCA ACTACTATCC GATCTGCCCT AACCCGGACC TAACCGTCGG TGTTGGTCGC CACTCAGACG TCTCTTCTCT CACTATTCTC TTACAAGATC AGATCGGCGG TCTACACGTG CGTTCTCTGG CGTCAGGGAA CTGGGTTCAC GTGCCACCGG TTCCCGGATC TTTTGTGATC AACATCGGAG ATGCGATGCA GATCTTGAGC AATGGTCGGT ACAAGAGCGT GGAGCATCGT GTCTTAGCCA ATGGCAACAA TAACAGAATC TCTGTTCCTA TCTTTGTGAA TCCAAAACCA GAGTCAGTGA TTGGTCCTCT ACCTGAGGTG ATTGCAAATG GAGAGGAACC GATTTACAGA GACGTCCTGT ACTCTGATTA CGTCAGGTAT TTCTTCAGGA AGGCACACGA CGGAAAGAAA ACCGTCGATT ACGCCAAGAT CTGATCACAA TCGACCTCGA GGAGTTCGAT TTCTTTTTGT TTCATGTTTG TGTTGTGTGT GAGTGAATAA AAAAAGATGT CTTCTTGAAC CAGTTTCTCT GTTCAGAATT GTGTTGTAAA ATTTACTATC ATTGATCAAT ACAGTTTTTC TTTTATCAGA CT 
Length1282
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5922856.. 5924245
Download Sequence
A.thaliana
AGI-codeAT3G13610.1
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summary
Alias[F6'H1]
Gene coexpression
MR
MR Locus Description
5.65685 Ahg930767
31.0805 Ahg490815 DNA binding with one finger 4.7
37.7624 Ahg896308 phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases
50.4975 Ahg923713
53.8331 Ahg930930
55.4617 Ahg489722 Histone superfamily protein
56.3915 Ahg945046
57.7841 Ahg933858 RALF-like 16
69.606 Virus0615
70.1641 Ahg914248
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression