| Annotation |
|---|
| Description | jgi|Araly1|478949|fgenesh2_kg.3__1650__AT3G15170.1 |
| Sequence |
ATTTTTAGAG CTTTCTTCTT GTGCCGACAA TGGATGTTGA TGTGTTTAAC GGTTGGGGGA GGCCAAGGTA TGAAGATGAA ACCCTAATGC CACCTGGGTT TAGATTTCAT CCAACTGATG AAGAGCTGAT CACTTACTAT CTCCTCAAGA AAGTTCTTGA CTCCAATTTC TCTTGTGCCG CCATTTCTCA AGTTGATCTC AACAAGTCTG AGCCTTGGGA GCTTCCTGAG AAAGCGAAAA TGGGGGAGAA AGAATGGTAC TTTTTCACAC TAAGAGATCG AAAATACCCA ACTGGACTAA GAACGAACAG AGCAACAGAA GCTGGTTACT GGAAAGCCAC AGGTAAAGAC AGAGAGATCA AAAGCTCAAA GACAAAATCA CTTCTCGGGA TGAAGAAAAC TCTTGTCTTT TACAAAGGCA GAGCTCCTAA AGGAGAGAAG AGTTGTTGGG TCATGCATGA GTATCGCCTT GACGGCAAAT TCTCTTACCA TTACATTTCT TCTTCCGCTA AGGATGAATG GGTTCTCTGT AAAGTTTGTC TGAAAAGCGG CGTAGTTAGC AGAGAGACAA ACTTGATCTC TTCTTCTTCT TCTTCTTCTT CTGCCGTCGC CGGAGAGTAC TCCTCTGCCG GATCTGTAAT TGCTCCGATC ATCAATACCT TTGCGACGGA GCACGTGTCC TGTTTCTCCA ATAACTCTGC TGCTCATACC GATGCGAGCT TCCATACATA CCTTCCCGCT CCACCACCGT CACTCCCGCC ACGTCAGCCT CGTCACGTCG GCGATGACGT GGTGTTTGGT CAGTTTCTGG ATTTGGGATC ATCGGGACAG GTTAATTTCG ATGCAGCAGC AGCGTTCTTT CCGAATCTAC CTTCTCTGCC TCCAACGGTT CTTCCTCCTC CTCCGTCATT TGCAATGTTC GGTGGAGGCT CCGCCGTGAG TGTCTGGCCG TTTGCTCTCT GATCGTCATG CGG |
| Length | 973 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 6003448.. 6004877 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G15170.1 |
| Description | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
| TAIR curator summary | Encodes a transcription factor involved in shoot apical meristem formation and auxin-mediated lateral root formation. The gene is thought not to be involved in stress responses (NaCl, auxins, ethylene). Cuc mutant was first recognized at the heart stage, where embryos lacking two distinct bulges of cotyledonary primordia were observed. |
| Alias | [ANAC054][ATNAC1][CUC1][Arabidopsis NAC domain containing protein 54][CUP-SHAPED COTYLEDON1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.4162 |
Ahg341207 | root hair specific 12 |
| 15.3623 |
Ahg328109 | Late embryogenesis abundant (LEA) protein |
| 22.4722 |
Ahg485821 | alpha/beta-Hydrolases superfamily protein |
| 32.4962 |
Ahg949012 | |
| 46.2817 |
Ahg925665 | |
| 55.3173 |
Ahg947612 | |
| 69.6491 |
Ahg358442 | structural maintenance of chromosomes 2 |
| 77.0973 |
Ahg921560 | FBD, F-box and Leucine Rich Repeat domains containing protein |
| 77.1881 |
Ahg897183 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
| 77.7496 |
Ahg938128 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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