Detail



ID : Ahg478950

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478950|fgenesh2_kg.3__1651__AT3G15180.1
Sequence
ATTCAGCTTG CTCGCAACGA AACATATTTT ACTGGAAAAA AACGGAAATC GCCATGGAAG ACGTTAACCA GTTGTTCGAT GCTGCTTTCG AGTTCGCACA CTATCCCGGC GCTCAAAACG AAGCCTCGGT CAAGGAATTT CTCGATCGCT TCCCTCTTCC CGTTATCTTC AATGCTTTGC AAACCGATCC GGATATACCA GGATTTGAAA ACACGTTGGT GACTTGCTTA GAGAGGCTGT TTAAGACTAA GTATGGTGCC TCACTTATTC CTCAGTATAT GCCTGTTCTG CAAGTTGGTC TCAAGGCAGA TTCTGCAATA GTTAAATCTC TGGCTTGCAA AACTGTCCTT TGTCTCTTGG AGGATTGCGA TACAAACGAT GTTTCTCCTG TTCAGCTAGT TGTTAGCAAT GGCATATACC CTCTTCTGCT TGATTATATC ATTAACAGCG ATGATGAAGT GGCACATGCT GCAAGTGAGA CAATTAAGAG TCTAGCACGC TTCCCTAATG CAATGTCTGT AATTTTCCCT TCTGAAACCA ACGATGCTAC ACATCTTCGT AACCTTGCTG CAAGGTGTTC GTCACTGGCA CGAGTCCGGG TTTTGTCTTT GATAGTGAAG CTTTTTTCGA TTTCTCGACT TGTAGCTTCA GAAATTAAGA AATCAGGGCT TCTTGATTTG CTGGAGGCAG AAATGAAGGG TACAAAAGAC ACTCTTGTGA TCTTAAATGT TCTGGAACTC TACTATGAGT TAATGGAAGT GGAGCACAGT TCAGAGTTCG TGCCACAAAC TTCTCTTATT CAGCTGTTGT GTTCTATCAT CAGTGGTACA TCGACGGGAC CCTATGAAAA GTTAAGAGCA ATGATGATTA GTGGCAGGCT ACTCTCAAAG GAAAATATCT ACAAAGTCGT GGAAGAAGCT AGTGTGAAGG CGTTAATTTC AGCTATTGAT GGGAGTCTGG AGTCGGTGGA GATGAATGAT ACTGATGCAC AGGAAGCTGC CATTGATGCA CTTGGTCAGA TTGGATCAAC AACGAAGGGA GCGGATATGG TGCTTTCAAC TTCACTTCCA GCTGCAAGAC ATGTTGTAGC TTCTGCCTTT GATCGTAATG CACATGGAAA ACAGTTGGCT GCACTGCATG CACTGGCAAA CATCGCAGGT GAAACACGAC CTAAGAGCAA CAGAATAGTT GATGGAAAAG CTGAAGAAAG CCTTAGATGT TTGATATACG ATGTTGCAGC ACAGAGCACA AAACTAACCC CATCTGGTTT ATTCCTCTCA GTTCTTCAAC AAAGCTCAGA GATTCGTCTT GCGGGTTATA GAACGTTAAC AGCATTGGTG GCACGGCCAT GGTGCCTGGT GGAAATCTTG TCCAAAGAAG AGATAATAAA CATAGTTACG GATGCAACCA CTGAAACTGC AAAAATAGCA ATGGAAGCAA GGTATAACTG CTGCAAAGCA ATTCACGAAG CGTTCTTGTG TAGTAACTTT GTTGATGACC CTCGTCGTAA AAAAACCGGT GAAAAGTTGC AAGAAGCTGT TCGAAGTGGA CCATACATGT CGAAGAAGCA CAGAGGTGCA CGACCAGAAG TAATGACTGG CGAAGGATTT TAAAGACATA ACTAAAGAAA AAAGTTTAAA CTTCTTTGTT AACCAAAGTT TTTTTTATCT TCTCTGGCTG TTCGATAAGT AAACTTTAGT TCTTTCTAAA CGAGGGCTAG GACTAAACGT TTTGGCGGTT GAAATTTGTG TTCTTTACTT T 
Length1761
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6010235.. 6014354
Download Sequence
A.thaliana
AGI-codeAT3G15180.2
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.83095 Ahg471723 CASC3/Barentsz eIF4AIII binding
11.8322 Ahg495887 MIF4G domain-containing protein / MA3 domain-containing protein
18.3303 Ahg925040 Potassium transporter family protein
20.5913 Ahg922941 AAA-type ATPase family protein
23.9165 Ahg921163 BTB/POZ domain-containing protein
24.1868 Ahg927599 Galactose mutarotase-like superfamily protein
24.7386 Ahg475736 senescence-associated family protein
25.4558 Ahg943269 thioredoxin family protein
28 Ahg919955 Protein kinase superfamily protein
30.7409 Ahg915639 topoisomerase II
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression