| Annotation |
|---|
| Description | jgi|Araly1|479130|fgenesh2_kg.3__1831__AT3G16640.1 |
| Sequence |
CTCGTCGCTG CGTCTCTCTC CCGCAACCTT CAATTTTCGT TAATTCACAT CCATCGGAGA GAGAGAGATA AATAAATCAA ATAAGCGACC ATGTTGGTGT ACACAGATCT TCTCACCGGT GATGAGCTTC TGTCTGACTC TTTCCCTTAC AAGGAGATTG AGAATGGAAT TCTTTGGGAA GTAGAAGGAA AGTGGGTTAC TCTGGGAGCT GTAGATGTTA ACATTGGTGC CAATCCATCT GCTGAAGAAG GTGGTGAGGA TGAGGGTGTT GATGACTCTG CTCAAAAGGT TGTTGACATT GTCGACACCT TCAGACTTCA GGAGCAACCA ACTTATGACA AGAAGGGATT CGTCGCTTAT ATTAAGAAAT ACATCAAGTC GTTGACACCC AAGCTCAACG AAGAACAGCA GGAATCCTTC AAGAAGGGTA TTGAGGGAGC TACCAAGTAC CTTCTCCCCA AGCTCAAAGA CCTCCAATTC TTTGTTGGGG AGTCAATGCA CGATGACAGC TCTTTGGTCT TTGCCTACTA CAAGGATGGT GCAACTAACC CAACATTTTT GTACTTCGCA CATGGTTTGA AGGAGGTCAA GTGCTGAGAG AGAAGCTCTC TTTGGGTTAC TCTGGTCGGC GCAGCGACTC TCTAAGTTTA TGTTTCTTTA TATTGTCTCG TGTTTCGTCG TCCCCTATTA AAATTACCTA CCAGTTTGCT TTTGTCTCTT CTTCTCTCCT GTGTTGGATT TCTTTTAAGT TATTGAATCC GAAAACAACG GTTTATCAGT TTCTATTAGT TGAATTTTGG TCGTGTGATA TCTCTTTTTG CTTTTCTAAT TTAAGGGTTG GTTACTCCCG AATCTCGAGG CAAGTTTATA |
| Length | 870 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 6669271.. 6670910 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G16640.1 |
| Description | translationally controlled tumor protein |
| TAIR curator summary | Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila. In flies, TCTP functions guanine nucleotide exchange factor in the TOR signaling pathway. TCTP is expressed throughout the plant with highest levels seen in meristematic regions of the shoot and root. Loss of function alleles are not transmitted through the male gametophyte due to defects in pollen tube growth. Hypomorphs, generated through RNAi, are dwarf and have smaller cells. These plants also have defects in lateral and primary root growth as well as root hair growth. The phenotypes are similar to TOR mutants suggesting that TCTP functions in the is pathway in Arabidopsis as well. |
| Alias | [TCTP][translationally controlled tumor protein] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg475701 | ADP-ribosylation factor A1E |
| 1.41421 |
Ahg481806 | CAX interacting protein 4 |
| 1.73205 |
Ahg914913 | drought-induced 19 |
| 2.23607 |
Ahg327957 | Histone superfamily protein |
| 2.44949 |
Ahg491198 | conserved peptide upstream open reading frame 2 |
| 4.58258 |
Ahg474234 | A20/AN1-like zinc finger family protein |
| 5.09902 |
Ahg473330 | |
| 5.2915 |
Ahg316611 | Expressed protein |
| 5.2915 |
Ahg495275 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 6 |
Ahg474823 | production of anthocyanin pigment 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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